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GitHub / omics-datascience / multiomix

Multiomix platform source code

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/omics-datascience%2Fmultiomix

Stars: 5
Forks: 0
Open Issues: 0

License: gpl-3.0
Language: TypeScript
Repo Size: 19.7 MB
Dependencies: 1,906

Created: almost 3 years ago
Updated: 3 months ago
Last pushed: 15 days ago
Last synced: 14 days ago

Topics: bioinformatics, django, docker, epigenomics, python

Files

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Readme

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Dependencies

docker-compose_dist.yml docker

mongo 4.2
nginx 1.19.3
omicsdatascience/multiomix 4.7.1
postgres 13
redis 6.0.8

src/frontend/static/frontend/package.json npm

@types/react ^16.9.19 development
@types/react-dom ^16.9.5 development
@types/validator ^13.7.2 development
@typescript-eslint/eslint-plugin ^2.24.0 development
@typescript-eslint/parser ^2.24.0 development
clean-webpack-plugin ^3.0.0 development
css-loader ^3.4.2 development
eslint ^6.8.0 development
eslint-config-standard ^14.1.0 development
eslint-plugin-import ^2.20.1 development
eslint-plugin-jsdoc ^22.0.1 development
eslint-plugin-node ^11.0.0 development
eslint-plugin-promise ^4.2.1 development
eslint-plugin-react ^7.19.0 development
eslint-plugin-react-hooks ^3.0.0 development
eslint-plugin-standard ^4.0.1 development
mini-css-extract-plugin ^0.9.0 development
optimize-css-assets-webpack-plugin ^4.0.0 development
terser-webpack-plugin ^2.3.4 development
ts-loader ^6.2.1 development
typescript ^3.7.5 development
url-loader ^3.0.0 development
webpack ^4.44.2 development
webpack-bundle-tracker ^0.4.3 development
webpack-cli ^3.3.10 development
webpack-merge ^5.0.9 development
@data-ui/histogram 0.0.84
@data-ui/xy-chart 0.0.84
@gamestdio/websocket ^0.3.2
apexcharts ^3.24.0
axios ^0.21.1
d3 ^3.5.17
dayjs ^1.8.22
ky ^0.30.0
lodash ^4.17.15
neo-react-semantic-ui-range ^0.3.6
react ^16.12.0
react-apexcharts ^1.3.6
react-avatar ^4.0.0
react-dom ^16.12.0
semantic-ui-css ^2.4.1
semantic-ui-react ^0.88.2
spark-md5 ^3.0.2
typeface-roboto 0.0.75
validator ^13.7.0

config/requirements.txt pypi

Django ==3.2.13
channels ==2.4.0
channels-redis ==3.1.0
daphne ==2.5.0
django-chunked-upload ==2.0.0
django-email-verification ==0.0.7
django-filter ==2.4.0
django-generate-secret-key ==1.0.2
django-stubs ==1.11.0
django-webpack-loader ==0.7.0
djangorestframework ==3.12.1
ggca ==0.4.1
lifelines ==0.25.8
mypy ==0.931
mypy-extensions ==0.4.3
numpy ==1.18.1
pandas ==1.0.5
psycopg2-binary ==2.8.6
pymongo ==3.11.0
requests ==2.23.0
scipy ==1.4.1
statsmodels ==0.11.1

.github/workflows/main-pr-wf.yaml actions

actions/checkout v2 composite
actions/github-script v3 composite
tm-bverret/docker-exist-action v1.1.2 composite

.github/workflows/main-wf.yaml actions

actions/checkout v2 composite
actions/setup-node v1 composite
actions/setup-python v2 composite
anothrNick/github-tag-action 1.36.0 composite
docker/build-push-action v2 composite
docker/login-action v1 composite
docker/setup-buildx-action v1 composite
docker/setup-qemu-action v1 composite
mongo 4.2 docker
postgres 13 docker
redis * docker

.github/workflows/pr-wf.yaml actions

actions/checkout v2 composite
actions/setup-node v1 composite
actions/setup-python v2 composite
mongo 4.2 docker
postgres 13 docker
redis * docker

Dockerfile docker

python 3.8.6-buster build

docker-compose.dev.yml docker

adminer latest
mongo 4.2
mongo-express 0.54.0
postgres 13
redis 6.0.8

src/frontend/static/frontend/package-lock.json npm

1808 dependencies