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GitHub / omnideconv / SimBu
Simulate pseudo-bulk RNAseq samples from scRNAseq expression data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/omnideconv%2FSimBu
Stars: 12
Forks: 1
Open Issues: 7
License: gpl-3.0
Language: R
Repo Size: 18.6 MB
Dependencies:
42
Created: about 3 years ago
Updated: 23 days ago
Last pushed: 19 days ago
Last synced: 16 days ago
Commit Stats
Commits: 222
Authors: 10
Mean commits per author: 22.2
Development Distribution Score: 0.315
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/omnideconv/SimBu
Files
Dependencies
- BiocParallel * imports
- Matrix >= 1.3.3 imports
- RColorBrewer * imports
- RCurl * imports
- SummarizedExperiment * imports
- basilisk * imports
- data.table * imports
- dplyr * imports
- ggplot2 * imports
- methods * imports
- phyloseq * imports
- proxyC * imports
- reticulate * imports
- sparseMatrixStats * imports
- tidyr * imports
- tools * imports
- Seurat * suggests
- curl * suggests
- knitr * suggests
- matrixStats * suggests
- rmarkdown * suggests
- testthat >= 3.0.0 suggests
- actions/checkout v2 composite
- insightsengineering/bioc-check-action v1 composite
- JamesIves/github-pages-deploy-action 4.1.4 composite
- actions/checkout v2 composite
- nwtgck/actions-netlify v1.2 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- actions/checkout v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- stefanzweifel/git-auto-commit-action v4 composite
- actions/checkout v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- actions/checkout v2 composite
- r-lib/actions/check-r-package v2 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite