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Package Usage: cran: proxyC
Computes Proximity in Large Sparse Matrices
15 versions
Latest release: 7 months ago
7 dependent packages
8,345 downloads last month
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Dependent Repos 17
omnideconv/SimBu
Simulate pseudo-bulk RNAseq samples from scRNAseq expression data- * DESCRIPTION
Size: 18.6 MB - Last synced: 21 days ago - Pushed: 24 days ago
koheiw/quanteda.core 📦
- >= 0.1.4 DESCRIPTION
Size: 620 MB - Last synced: 10 months ago - Pushed: over 3 years ago
thieled/dictvectoR
'dictvectoR' measures the similarity between a concept dictionary and documents, using fastText word vectors. Implements the "Distributed-Dictionary-Representation" (Garten et al. 2018) method in R.- * DESCRIPTION
Size: 5.6 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
qzhang503/proteoQ
Processing and analysis of proteomics data- * DESCRIPTION
Size: 531 MB - Last synced: 3 months ago - Pushed: 3 months ago
dynverse/dynutils
Common Functionality for the 'dynverse' Packages- * DESCRIPTION
Size: 2.32 MB - Last synced: 10 days ago - Pushed: over 1 year ago
YuanlongHu/immcp
Polypharmacology Toolkit for Traditional Chinese Medicine Research- * DESCRIPTION
Size: 10.4 MB - Last synced: 3 months ago - Pushed: over 1 year ago
tidymodels/applicable
Quantify extrapolation of new samples given a training set- * DESCRIPTION
Size: 4.45 MB - Last synced: 22 days ago - Pushed: 29 days ago
quanteda/quanteda.textstats
Textual statistics for quanteda- >= 0.1.4 DESCRIPTION
Size: 486 KB - Last synced: about 2 months ago - Pushed: about 2 months ago
koheiw/LSX
Semi-supervised algorithm for document scaling- * DESCRIPTION
Size: 114 MB - Last synced: 1 day ago - Pushed: 1 day ago
jokergoo/simplifyEnrichment
Simplify functional enrichment results- * DESCRIPTION
Size: 122 MB - Last synced: 22 days ago - Pushed: 7 months ago
koheiw/seededlda
LDA for semisupervised topic modeling- >= 0.2.4 DESCRIPTION
Size: 156 MB - Last synced: 4 months ago - Pushed: 11 months ago
morris-lab/CellTagR
This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.- * DESCRIPTION
Size: 39 MB - Last synced: 10 months ago - Pushed: over 1 year ago
SydneyBioX/scClassify
Hierarchical classification of cells- * DESCRIPTION
Size: 522 MB - Last synced: 6 months ago - Pushed: over 2 years ago
SydneyBioX/scMerge
Statistical approach for removing unwanted variation from multiple single-cell datasets- * DESCRIPTION
Size: 128 MB - Last synced: 18 days ago - Pushed: about 2 months ago
zhanghao-njmu/SCP
An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.- * DESCRIPTION
Size: 788 MB - Last synced: 3 months ago - Pushed: 4 months ago
cran/dynutils
:exclamation: This is a read-only mirror of the CRAN R package repository. dynutils — Common Functionality for the 'dynverse' Packages. Homepage: https://github.com/dynverse/dynutils Report bugs for this package: https://github.com/dynverse/dynutils/issues- >= 0.3.3 DESCRIPTION
Size: 639 KB - Last synced: 10 months ago - Pushed: over 1 year ago
cran/applicable
:exclamation: This is a read-only mirror of the CRAN R package repository. applicable — A Compilation of Applicability Domain Methods. Homepage: https://github.com/tidymodels/applicable, https://applicable.tidymodels.org Report bugs for this package: https://github.com/tidymodels/applicable/issues- * DESCRIPTION
Size: 698 KB - Last synced: about 1 month ago - Pushed: about 1 month ago
cran/LSX
:exclamation: This is a read-only mirror of the CRAN R package repository. LSX — Semi-Supervised Algorithm for Document Scaling. Homepage: https://koheiw.github.io/LSX/ Report bugs for this package: https://github.com/koheiw/LSX/issues- * DESCRIPTION
Size: 1.6 MB - Last synced: 3 months ago - Pushed: 3 months ago
cran/seededlda
:exclamation: This is a read-only mirror of the CRAN R package repository. seededlda — Seeded Sequential LDA for Topic Modeling. Homepage: https://github.com/koheiw/seededlda, https://koheiw.github.io/seededlda/ Report bugs for this package: https://github.com/koheiw/seededlda/issues- >= 0.3.1 DESCRIPTION
Size: 3.66 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
TeodoraTockovska/CellTagR Fork of morris-lab/CellTagR
This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.- * DESCRIPTION
Size: 39.1 MB - Last synced: 9 months ago - Pushed: over 3 years ago
tchen-tt/SCP Fork of zhanghao-njmu/SCP
Single Cell Pipeline- * DESCRIPTION
Size: 215 MB - Last synced: 9 months ago - Pushed: over 1 year ago
MInsYang/SCP Fork of zhanghao-njmu/SCP
SCP provides a comprehensive set of tools for single cell data processing and downstream analysis.- * DESCRIPTION
Size: 677 MB - Last synced: 9 months ago - Pushed: 9 months ago
sayanmitra/scFeatures Fork of SydneyBioX/scFeatures
- * DESCRIPTION
Size: 211 MB - Last synced: 9 months ago - Pushed: 9 months ago
lsteuernagel/scUtils
Single-cell utility functions- * DESCRIPTION
Size: 54.7 KB - Last synced: 8 months ago - Pushed: 8 months ago
SydneyBioX/CellSPA
Cell Segmentation Performance Assessment- * DESCRIPTION
Size: 21 MB - Last synced: 6 months ago - Pushed: 6 months ago
icefoxx/Gsignatures
Calculate normalized enrichment score for gene sets. To overcome the dropout effects in scRNA-seq data, imputate gene ranking via gene co-expression modules detected by affinity propagation (AP)- * DESCRIPTION
Size: 23.1 MB - Last synced: 5 months ago - Pushed: 5 months ago
bioc/simona
This is a read-only mirror of the git repos at https://bioconductor.org- * DESCRIPTION
Size: 45.4 MB - Last synced: 30 days ago - Pushed: 30 days ago
