GitHub / pysam-developers / pysam
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.
JSON API: http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pysam-developers%2Fpysam
Stars: 816
Forks: 282
Open issues: 280
License: mit
Language: Cython
Size: 21.1 MB
Dependencies parsed at: Pending
Created at: about 11 years ago
Updated at: 29 days ago
Pushed at: about 1 month ago
Last synced at: 17 days ago
Commit Stats
Commits: 1840
Authors: 120
Mean commits per author: 15.33
Development Distribution Score: 0.447
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/pysam-developers/pysam
Topics: bioinformatics, htslib, ngs, python