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GitHub / scverse / squidpy
Spatial Single Cell Analysis in Python
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scverse%2Fsquidpy
Stars: 396
Forks: 71
Open Issues: 87
License: bsd-3-clause
Language: Python
Repo Size: 9.05 MB
Dependencies:
44
Created: almost 4 years ago
Updated: 1 day ago
Last pushed: 1 day ago
Last synced: 1 day ago
Commit Stats
Commits: 514
Authors: 37
Mean commits per author: 13.89
Development Distribution Score: 0.745
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/scverse/squidpy
Topics: data-visualization, image-analysis, single-cell-genomics, single-cell-rna-seq, spatial-analysis, spatial-transcriptomics, squidpy
Files
Dependencies
- actions/checkout v2 composite
- actions/setup-python v2 composite
- everlytic/branch-merge 1.1.2 composite
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- actions/setup-python v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- benc-uk/workflow-dispatch v1 composite
- stefanzweifel/git-auto-commit-action v4 composite
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- benc-uk/workflow-dispatch v1 composite
- peter-evans/repository-dispatch v1 composite
- actions/checkout v3 composite
- actions/setup-python v4 composite
- Pillow >=8.0.0
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- pandas >=2.1.0
- scanpy >=1.9.3
- scikit-image >=0.19,<=0.20
- scikit-learn >=0.24.0
- spatialdata *
- statsmodels >=0.12.0
- tifffile !=2022.4.22
- tqdm >=4.50.2
- validators >=0.18.2
- xarray >=0.16.1
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