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GitHub / tadorfer / protlearn
A Python package for extracting protein sequence features
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tadorfer%2Fprotlearn
Stars: 58
Forks: 8
Open Issues: 10
License: mit
Language: Python
Repo Size: 9.84 MB
Dependencies:
69
Created: about 4 years ago
Updated: about 2 months ago
Last pushed: over 1 year ago
Last synced: 18 days ago
Topics: amino-acids, feature-extraction, machine-learning, protein, python
Files
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Readme
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Dependencies
environment.yml
conda
- _py-xgboost-mutex 2.0
- biopython 1.78
- blas 1.0
- ca-certificates 2020.7.22
- certifi 2020.6.20
- cycler 0.10.0
- freetype 2.10.2
- intel-openmp 2019.4
- joblib 0.16.0
- jpeg 9d
- kiwisolver 1.2.0
- lcms2 2.11
- libcxx 10.0.1
- libedit 3.1.20191231
- libffi 3.3
- libgfortran 3.0.1
- libpng 1.6.37
- libtiff 4.1.0
- libwebp-base 1.1.0
- libxgboost 1.2.0
- llvm-openmp 10.0.1
- lz4-c 1.9.2
- matplotlib-base 3.3.2
- mkl 2019.4
- mkl-service 2.3.0
- mkl_fft 1.2.0
- mkl_random 1.1.1
- mlxtend 0.17.3
- ncurses 6.2
- numpy 1.19.1
- numpy-base 1.19.1
- olefile 0.46
- openssl 1.1.1h
- pandas 1.1.2
- pillow 7.2.0
- pip 20.2.3
- py-xgboost 1.2.0
- pyparsing 2.4.7
- python 3.8.5
- python-dateutil 2.8.1
- python_abi 3.8
- pytz 2020.1
- readline 8.0
- scikit-learn 0.23.2
- scipy 1.5.0
- setuptools 49.6.0
- six 1.15.0
- sqlite 3.33.0
- threadpoolctl 2.1.0
- tk 8.6.10
- tornado 6.0.4
- wheel 0.35.1
- xgboost 1.2.0
- xz 5.2.5
- zlib 1.2.11
- zstd 1.4.5
requirements.txt
pypi
- biopython *
- mlxtend *
- numpy ==1.22.0
- pandas *
- pytest-cov *
- scikit-learn *
- xgboost *