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GitHub / theislab / sfaira
data and model repository for single-cell data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/theislab%2Fsfaira
Stars: 133
Forks: 13
Open Issues: 166
License: bsd-3-clause
Language: Python
Repo Size: 11.3 MB
Dependencies:
64
Created: over 3 years ago
Updated: 21 days ago
Last pushed: 4 months ago
Last synced: 12 days ago
Files
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Readme
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Dependencies
requirements.txt
pypi
- IPython *
- PyYAML *
- anndata >=0.7.6
- boltons *
- click >=7.1.2
- cookiecutter >=1.7.2
- crossref_commons *
- dask *
- docutils *
- flatten-dict *
- fuzzywuzzy *
- h5py *
- loompy *
- matplotlib *
- networkx *
- numba *
- numpy >=1.16.4
- obonet *
- openpyxl *
- owlready2 *
- packaging >=20.8
- pandas *
- pyarrow *
- pytest >=6.2.2
- python-Levenshtein *
- questionary >=1.8.1
- requests >=2.25.1
- requests *
- rich >=9.10.0
- scanpy >=1.7.0
- scipy >=1.2.1
- seaborn *
- sparse *
- switchlang >=0.1.0
- tensorflow *
- torch *
- torchmetrics *
- tqdm *
- versioneer *
- xlrd ==1.
- zarr *
- actions/checkout v2 composite
- actions/setup-python v2.1.4 composite
.github/workflows/check_urls.yml
actions
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/checkout v2 composite
- actions/setup-python v2.1.4 composite
- mshick/add-pr-comment v1 composite
- actions/checkout v2 composite
- actions/setup-python v2.1.4 composite
- peaceiris/actions-gh-pages v3 composite
- actions/checkout v2 composite
- actions/setup-python v2.1.4 composite
.github/workflows/run_bandit.yml
actions
- actions/checkout v2 composite
- actions/setup-python v2.1.4 composite
- actions/checkout v2 composite
- actions/setup-python v2.1.4 composite