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GitHub / thelovelab / tximport
Transcript quantification import for modular pipelines
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/thelovelab%2Ftximport
Stars: 130
Forks: 33
Open Issues: 1
License: None
Language: R
Repo Size: 357 KB
Dependencies:
17
Created: over 8 years ago
Updated: 3 months ago
Last pushed: 3 months ago
Last synced: about 1 month ago
Topics: bioconductor, deseq2, rnaseq
Files
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Readme
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Dependencies
DESCRIPTION
cran
- methods * imports
- stats * imports
- utils * imports
- DESeq2 >= 1.11.6 suggests
- Matrix * suggests
- TxDb.Hsapiens.UCSC.hg19.knownGene * suggests
- edgeR * suggests
- eds * suggests
- jsonlite * suggests
- knitr * suggests
- limma * suggests
- matrixStats * suggests
- readr >= 0.2.2 suggests
- rhdf5 * suggests
- rmarkdown * suggests
- testthat * suggests
- tximportData * suggests