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GitHub / uclahs-cds / package-OmicsQC
Aggregation of QC metrics and outlier nomination for multi-sample studies
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/uclahs-cds%2Fpackage-OmicsQC
Stars: 0
Forks: 0
Open Issues: 5
License: gpl-2.0
Language: R
Repo Size: 9.13 MB
Dependencies:
20
Created: over 1 year ago
Updated: about 1 month ago
Last pushed: about 1 month ago
Last synced: about 1 month ago
Topics: cosine-similarity, genomics, ngs-analysis, quality-control, r
Files
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Readme
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Dependencies
.github/workflows/CICD-base.yaml
actions
- actions/checkout v2 composite
- docker://ghcr.io/uclahs-cds/cicd-base latest composite
- r-lib/actions/setup-tinytex v2 composite
- uclahs-cds/tool-R-CMD-check-action stable composite
.github/workflows/pkgdown.yaml
actions
- JamesIves/github-pages-deploy-action v4 composite
- actions/checkout v3 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
DESCRIPTION
cran
- R >= 2.10 depends
- BoutrosLab.plotting.general * imports
- fitdistrplus * imports
- lsa * imports
- stats * imports
- utils * imports
- dplyr * suggests
- kableExtra * suggests
- knitr * suggests
- rmarkdown * suggests
- testthat >= 3.0.0 suggests