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GitHub / yunguan-wang / Tissue_positioning_system
A quantitative, unsupervised algorithm for hapatocytes zonal expression analysis
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/yunguan-wang%2FTissue_positioning_system
Stars: 4
Forks: 2
Open Issues: 0
License: None
Language: Python
Repo Size: 101 MB
Dependencies:
112
Created: over 4 years ago
Updated: about 1 year ago
Last pushed: about 1 year ago
Last synced: 8 months ago
Files
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Readme
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Dependencies
environment.yml
conda
- appdirs 1.4.3
- attrs 19.1.0
- backcall 0.1.0
- black 19.3b0
- blas 1.0
- bleach 3.1.0
- ca-certificates 2019.9.11
- certifi 2019.9.11
- click 7.0
- cloudpickle 1.2.2
- colorama 0.4.1
- cycler 0.10.0
- cytoolz 0.10.0
- dask-core 2.4.0
- decorator 4.4.0
- defusedxml 0.5.0
- entrypoints 0.3
- freetype 2.10.0
- icc_rt 2019.0.0
- icu 64.2
- imageio 2.5.0
- intel-openmp 2019.4
- ipykernel 5.1.2
- ipython 7.8.0
- ipython_genutils 0.2.0
- jedi 0.15.1
- jinja2 2.10.1
- joblib 0.13.2
- jpeg 9c
- json5 0.8.5
- jsonschema 3.0.2
- jupyter_client 5.3.1
- jupyter_core 4.4.0
- jupyterlab 1.1.3
- jupyterlab_server 1.0.6
- kiwisolver 1.1.0
- libblas 3.8.0
- libcblas 3.8.0
- libclang 8.0.1
- liblapack 3.8.0
- liblapacke 3.8.0
- libpng 1.6.37
- libsodium 1.0.17
- libtiff 4.0.10
- libwebp 1.0.2
- lz4-c 1.8.3
- m2w64-gcc-libgfortran 5.3.0
- m2w64-gcc-libs 5.3.0
- m2w64-gcc-libs-core 5.3.0
- m2w64-gmp 6.1.0
- m2w64-libwinpthread-git 5.0.0.4634.697f757
- markupsafe 1.1.1
- matplotlib-base 3.1.1
- mistune 0.8.4
- mkl 2019.4
- mkl-service 2.3.0
- msys2-conda-epoch 20160418
- nbconvert 5.6.0
- nbformat 4.4.0
- networkx 2.3
- notebook 6.0.1
- numpy 1.17.2
- olefile 0.46
- opencv 4.1.1
- openssl 1.1.1c
- pandas 0.25.1
- pandoc 2.7.3
- pandocfilters 1.4.2
- parso 0.5.1
- patsy 0.5.1
- pickleshare 0.7.5
- pillow 6.1.0
- pip 19.2.3
- prometheus_client 0.7.1
- prompt_toolkit 2.0.9
- pygments 2.4.2
- pyparsing 2.4.2
- pyrsistent 0.15.4
- python 3.6.7
- python-dateutil 2.8.0
- pytz 2019.2
- pywavelets 1.0.3
- pywinpty 0.5.5
- pyzmq 18.1.0
- qt 5.12.1
- scikit-image 0.15.0
- scikit-learn 0.21.3
- scipy 1.3.1
- seaborn 0.9.0
- send2trash 1.5.0
- setuptools 41.2.0
- six 1.12.0
- sqlite 3.29.0
- statsmodels 0.10.1
- terminado 0.8.2
- testpath 0.4.2
- tk 8.6.9
- toml 0.10.0
- toolz 0.10.0
- tornado 6.0.3
- traitlets 4.3.2
- vc 14.1
- vs2015_runtime 14.16.27012
- wcwidth 0.1.7
- webencodings 0.5.1
- wheel 0.33.6
- wincertstore 0.2
- winpty 0.4.3
- xz 5.2.4
- zeromq 4.3.2
- zlib 1.2.11
- zstd 1.4.0