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GitHub topics: computational-biophysics

CordeiroLab/CordeiroLab.github.io

🧠🔬At the Cordeiro Lab, we investigate how intrinsically disordered proteins and biomolecular assemblies orchestrate cellular organization, pathogenic survival, and biotechnological innovation.

Language: HTML - Size: 30 MB - Last synced at: about 7 hours ago - Pushed at: about 7 hours ago - Stars: 0 - Forks: 0

berylgithub/ppbap

Protein-protein interaction Binding Affinity Prediction

Language: Jupyter Notebook - Size: 1.68 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 5 - Forks: 1

yao-laboratory/RNAFoldAssess

Framework for benchmarking RNA secondary structure prediction algorithms.

Language: Python - Size: 66.3 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 2 - Forks: 1

soilqualitylab/soilqualitylab.github.io

Sequester C as LIFE.

Language: HTML - Size: 688 KB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 0

abdulrashidiii/Chem359_programming_project

A tool that locates and lists the intramolecular interactions in each frame of a NetCDF MD trajectory file

Language: C++ - Size: 5.55 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

kamerlinlab/micellemaker

Micelle Maker source code

Language: Python - Size: 124 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

Pappulab/dynamical-control

This GitHub repository contains the code and data for the manuscript "Dynamical control enables the formation of demixed biomolecular condensates" (BioRxiv link: https://www.biorxiv.org/content/10.1101/2023.01.04.522702v1)

Language: Jupyter Notebook - Size: 648 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

tekpinar/CMB-Scripts

Computational Molecular Biophysics Scripts

Language: Python - Size: 807 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0

punamrattu/computational_biophysics

Scripts for analysing MD simulations of nanopores and DNA translocation (ionic current, translocation rate, pore hydrophobicity).

Language: Shell - Size: 20.5 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

srcastillo/NMA-Suite

This repository contains different scripts used for the normal mode analysis of biomolecules with known crystal structures.

Language: Jupyter Notebook - Size: 1.8 MB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 2 - Forks: 1