Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: conformation

chao1224/MoleculeSDE

A Group Symmetric Stochastic Differential Equation Model for Molecule Multi-modal Pretraining, ICML'23

Language: Python - Size: 22.5 MB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 29 - Forks: 2

Pharmacelera/Query-models-to-3DLBVS

Data set (DUDE+ Diverse) and scripts from the article: On the relevance of query definition in the performance of 3D ligand-based virtual screening

Language: Python - Size: 7.51 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 1

JosePereiraUA/rosetta-scripts

Some Rosetta Scripts that allow for various simple tasks

Language: Python - Size: 29.1 MB - Last synced: 4 months ago - Pushed: over 4 years ago - Stars: 9 - Forks: 2

MinkaiXu/GeoDiff

Implementation of GeoDiff: a Geometric Diffusion Model for Molecular Conformation Generation (ICLR 2022).

Language: Python - Size: 2.19 MB - Last synced: 7 months ago - Pushed: about 1 year ago - Stars: 257 - Forks: 53

GeoRouv/RMSD

📐 Implementation of the c-RMSD and d-RMSD algorithms

Language: Jupyter Notebook - Size: 265 KB - Last synced: 8 months ago - Pushed: about 3 years ago - Stars: 3 - Forks: 0

JensKrumsieck/PorphyStruct

Structural Analysis of Porphyrinoids & Corrinoids

Language: C# - Size: 22.1 MB - Last synced: 8 months ago - Pushed: 8 months ago - Stars: 7 - Forks: 2

polly-code/DPDchrom

Reconstruction of 3D conformation of chromatin fiber using single cell Hi-C data

Language: Fortran - Size: 95.3 MB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 3 - Forks: 0

JensKrumsieck/porphystruct-scripts

This Repository contains my companion scripts to PorphyStruct. Feel free to use, steal some code or do whatever you like 😎

Language: Jupyter Notebook - Size: 38.6 MB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 0 - Forks: 0

MinkaiXu/CGCF-ConfGen

:test_tube: Learning Neural Generative Dynamics for Molecular Conformation Generation (ICLR 2021)

Language: Python - Size: 1.43 MB - Last synced: 8 months ago - Pushed: almost 3 years ago - Stars: 43 - Forks: 16

MinkaiXu/ConfVAE-ICML21

An End-to-End Framework for Molecular Conformation Generation via Bilevel Programming (ICML'21)

Language: Python - Size: 381 KB - Last synced: over 1 year ago - Pushed: almost 3 years ago - Stars: 43 - Forks: 11

ChristinaAndrinopoyloy/Algorithms_in_Structural_Biology

2 homeworks for "Algorithms in Structural Biology" Master course of Data Science and Information Technologies (DSIT)

Language: Jupyter Notebook - Size: 8.68 MB - Last synced: over 1 year ago - Pushed: over 2 years ago - Stars: 2 - Forks: 0

JensKrumsieck/TauXplore

Calculate τ (Tau) Values (Geometry Index) for 4- and 5-coordinate complexes.

Language: C# - Size: 221 KB - Last synced: over 1 year ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

changhuixu/prevent-from-leaving

Angular prevent from leaving page

Language: TypeScript - Size: 209 KB - Last synced: over 1 year ago - Pushed: almost 4 years ago - Stars: 1 - Forks: 0