GitHub topics: data-release-pipeline
reactome/release-update-dois
Data-release-pipeline: Updates DOIs of pathways that were updated significantly between releases (these pathways will be tagged as needing a value in their doi attribute)
Language: Java - Size: 7.4 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 1 - Forks: 0
reactome/release-jenkins-utils
Data-release-pipeline: Utilities repository that contains files for initializing Release via Jenkins and general-use scripts used in Release
Language: Groovy - Size: 8.18 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 0 - Forks: 1
reactome/release-orthopairs
Data-release-pipeline: Retrieval of homology data (human to other species) from PANTHER (http://www.pantherdb.org/)
Language: Java - Size: 7.41 MB - Last synced at: 12 days ago - Pushed at: 13 days ago - Stars: 0 - Forks: 0
reactome/release-orthoinference
Data-release-pipeline: Orthology projection of human reactions and pathways to non-human species
Language: Java - Size: 7.62 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0
reactome/release-download-directory
Data-release-pipeline: Generation of files for the Reactome website download directory
Language: Java - Size: 7.57 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 1
reactome/release-biomodels
Data-release-pipeline: Insertion of BioModels identifiers cross-references (data generated by https://github.com/reactome/biomodels-mapper) for Pathway instances
Language: Java - Size: 212 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 1
reactome/release-update-stable-ids
Data-release-pipeline: Updates stable identifiers of manually curated instances
Language: Java - Size: 7.38 MB - Last synced at: 4 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0
reactome/add-links 📦
This is the AddLinks component of the Release system
Language: Java - Size: 2.03 MB - Last synced at: 4 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 1
reactome/release-data-exporter
Data-release-pipeline: Data exports for submission to NCBI, UCSC, and Europe PMC
Language: Java - Size: 377 KB - Last synced at: 4 months ago - Pushed at: 9 months ago - Stars: 1 - Forks: 0
reactome/release-go-update
Data-release-pipeline: Synchronization of gk_central GO instances with Gene Ontology (http://geneontology.org/)
Language: Java - Size: 7.43 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 1 - Forks: 0
reactome/release-common-lib
Data-release-pipeline: Common code for Reactome data-release-pipeline steps
Language: Java - Size: 8.01 MB - Last synced at: 2 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0
reactome/release-chebi-update
Data-release-pipeline: Synchronization of gk_central Reference Molecule instances with ChEBI (https://www.ebi.ac.uk/chebi/)
Language: Java - Size: 7.47 MB - Last synced at: 4 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0
reactome/release-cosmic-update
Code for updating COSMIC identifiers.
Language: Java - Size: 161 KB - Last synced at: 26 days ago - Pushed at: 26 days ago - Stars: 0 - Forks: 1
reactome/release-external-dependencies
This project's purpose is to check all external third-party dependencies required for the Reactome release and verify they are available and correct.
Language: Java - Size: 143 KB - Last synced at: 4 months ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0
reactome/release-other-identifiers
Data-release-pipeline: Retrieval and insertion of external identifiers for Reactome reference gene products (proteins)
Language: Java - Size: 31.3 KB - Last synced at: 4 months ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0