collaborativebioinformatics/Haplotype_matrix_clustering

Language: Jupyter Notebook - Size: 1.22 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 0 - Forks: 0

CCBR/Dockers

A collection of Dockerfiles to facilitate reproducibility across computing environments.

Language: Dockerfile - Size: 934 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 11 - Forks: 3

dnanexus/dxCompiler

WDL and CWL compiler for the DNAnexus platform

Language: Scala - Size: 10.9 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 33 - Forks: 17

moka-guys/dnanexus_normals_readcount_analysis

The app creates a panel of normals for Exomedepth

Language: Shell - Size: 8.79 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

moka-guys/dnanexus_ED_readcount_analysis

This app calculates the readcount for a batch of samples for CNV calling using ExomeDepth.

Language: Shell - Size: 24.4 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

moka-guys/dnanexus_ED_cnv_calling

Performs CNV calling using ExomeDepth.

Language: Shell - Size: 29.3 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0

moka-guys/dnanexus_duty_csv

DNAnexus implementation of duty_csv. To be used in conjunction with process_duty_csv

Language: Shell - Size: 34.2 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

moka-guys/dnanexus_congenica_upload

DNAnexus app for uploading samples to the Congenica analysis platform

Language: Shell - Size: 51.6 MB - Last synced at: 5 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 1

eastgenomics/automated-archiving

Python script to monitor archiving on DNANexus

Language: Python - Size: 1.51 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0

StanfordBioinformatics/trjread-source

Source files for DNAnexus applets

Language: XSLT - Size: 2.29 MB - Last synced at: about 1 year ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 2

StanfordBioinformatics/trjread-builder

Command-line tool to automatically build workflows on DNAnexus

Language: HTML - Size: 21.7 MB - Last synced at: about 1 year ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0

StanfordBioinformatics/trajectoread

Software suite for updating and managing data on DNAnexus

Size: 48.1 MB - Last synced at: about 1 year ago - Pushed at: over 8 years ago - Stars: 0 - Forks: 3

eastgenomics/eggd_athena 📦

DNAnexus app of Athena

Language: Shell - Size: 257 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

collaborativebioinformatics/DSVifier

A bioinformatics pipeline for rapidly evaluating variants and identifying causal variants.

Language: C++ - Size: 9.71 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 1

MikeRogers0/omniauth-dnanexus

OmniAuth Strategy for DNAnexus

Language: Ruby - Size: 15.6 KB - Last synced at: 5 days ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

ieee820/common-workflow-language Fork of common-workflow-language/common-workflow-language

Repository for the CWL standards. Use https://www.biostars.org/t/cwl/ for support 😊

Language: Python - Size: 3.34 MB - Last synced at: almost 2 years ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0

sammyjava/DNAnexus

DNAnexus platform applets

Language: C++ - Size: 397 MB - Last synced at: 2 months ago - Pushed at: almost 7 years ago - Stars: 0 - Forks: 0