GitHub topics: flim

Repositories

SofiaKapsiani/FLIMngo

Deep learning for fluorescence lifetime predictions

Language: Jupyter Notebook - Size: 135 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 4 - Forks: 1

SofiaKapsiani/FLIMPA

FLIMPA: An open-sourced software for phasor plot analyis of TCSPC-FLIM data

Language: Python - Size: 79.7 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 7 - Forks: 3

cgohlke/liffile

Read Leica image files (LIF, LOF, XLIF, XLCF, XLEF, and LIFEXT).

Language: Python - Size: 221 KB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 3 - Forks: 1

phasorpy/phasorpy

An open-source Python library for the analysis of fluorescence lifetime and hyperspectral images using the phasor approach.

Language: Python - Size: 631 KB - Last synced at: 20 days ago - Pushed at: 20 days ago - Stars: 28 - Forks: 10

cgohlke/ptufile

Read and write PicoQuant PTU and related files.

Language: Python - Size: 185 KB - Last synced at: 26 days ago - Pushed at: 2 months ago - Stars: 12 - Forks: 2

File format agnostic low level, high performance API to read and process time-tagged-time resolved (TTTR) data for single-molecule and image spectroscopy (Sample data: https://gitlab.peulen.xyz/skf/tttr-data)

Language: C++ - Size: 904 MB - Last synced at: 27 days ago - Pushed at: about 2 months ago - Stars: 21 - Forks: 2

LaboratoryOpticsBiosciences/FLUTE

Fluorescence Lifetime Ultimate Explorer (FLUTE) is a GUI for exploring and analyzing Fluorescence Lifetime Microscopy (FLIM) data

Language: Python - Size: 11.4 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 23 - Forks: 5

CreLox/FluorescenceLifetime

A MATLAB data analysis toolkit for Fluorescence Lifetime Imaging Microscopy (FLIM) and an Alba v5 time-resolved confocal microscope operations manual

Language: MATLAB - Size: 2.33 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 5 - Forks: 1

maurosilber/pawflim

Wavelet denoising of phasors.

Language: Python - Size: 126 KB - Last synced at: 16 days ago - Pushed at: 10 months ago - Stars: 3 - Forks: 0

Fluorescence-Tools/fit2x

Maximum likelihood fits for low photon count data - For active develeopment visit gitlab.peulen.xyz

Language: C++ - Size: 86.8 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 0

ChrisHal/PTU2BIN

Set of convenient tools to convert files in PicoQuant ptu format to pre-histogrammed bin files.

Language: C++ - Size: 3.01 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 1

yzhang34/saturation-compensated-FLIM

Saturation-compensated measurements for fluorescence lifetime imaging microscopy

Language: MATLAB - Size: 657 KB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 0 - Forks: 0

yzhang34/Kmeans-FLIM-Phasors

Automatic segmentation of intravital fluorescence microscopy images by K-means clustering of FLIM phasors

Language: MATLAB - Size: 140 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 3 - Forks: 2

artegoser/File-Library-Manager

CLI application for reading and creating FLIM libraries. The standard library will be updated all the time. The original library can serve as a repository of data about files by name, this provides quick access to the files you need.

Language: Python - Size: 9.74 MB - Last synced at: about 1 month ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 0