GitHub topics: flow-cytometry-analysis
gitdemont/IFC
Tools for Imaging Flow Cytometry
Language: R - Size: 1.89 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 4 - Forks: 2
whitews/FlowKit
A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces
Language: Python - Size: 137 MB - Last synced at: 14 days ago - Pushed at: 14 days ago - Stars: 171 - Forks: 50
jameswilsenach/FlowFI
FlowFI is a python-based package for selecting important features for gating of flow cytometry events and analysis of these features.
Language: Python - Size: 298 KB - Last synced at: 25 days ago - Pushed at: 25 days ago - Stars: 0 - Forks: 1
cytoflow/cytoflow
A Python toolbox for quantitative, reproducible flow cytometry analysis
Language: Python - Size: 158 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 188 - Forks: 53
whitews/FlowUtils
FlowUtils is a Python package containing various utility functions related to flow cytometry analysis, primarily focused on compensation and transformation tasks commonly used within the flow community.
Language: Python - Size: 6.65 MB - Last synced at: 11 days ago - Pushed at: 3 months ago - Stars: 16 - Forks: 11
whitews/FlowIO
A Python library for reading and writing Flow Cytometry Standard (FCS) files
Language: Python - Size: 11.5 MB - Last synced at: 9 days ago - Pushed at: about 1 month ago - Stars: 46 - Forks: 23
MargaritaLiarou1/TimeFlow
TimeFlow: a density-driven pseudotime method for flow cytometry data analysis.
Language: Jupyter Notebook - Size: 38.8 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 1 - Forks: 0
tlnagy/FCSFiles.jl
🧫 Read Flow Cytometry Standard (FCS) files in Julia
Language: Julia - Size: 3.45 MB - Last synced at: 11 days ago - Pushed at: over 2 years ago - Stars: 16 - Forks: 7
burtonrj/CytoPy 📦
A data-centric flow/mass cytometry automated analysis framework
Language: Python - Size: 140 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 38 - Forks: 9
taniawyss/flow-cytometry-analysis-with-R
Flow cytometry data analysis with R
Size: 110 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0
gitdemont/IFCip
Image Processing tools for Imaging Flow Cytometry
Language: C++ - Size: 864 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 3 - Forks: 0
xuesoso/DensityPlot
A simple python plotting package for density and scatter plotting.
Language: HTML - Size: 13.4 MB - Last synced at: 8 days ago - Pushed at: over 2 years ago - Stars: 5 - Forks: 1
JulianSpagnuolo/FACkit
FACkit is a complete R toolkit providing transformation, data-exploration, dimensional-reduction and clustering methods tailored to semi-automated analysis of FACS data
Language: R - Size: 2.06 MB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 0 - Forks: 2
gitdemont/IFCshiny
An R Interactive Shiny Application for the Analysis of Imaging and Conventional Flow Cytometry
Language: R - Size: 2.29 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0
MCFC-Community/MCFC_Data_challenge
Data Challenge for microbial community flow cytometry
Size: 9.77 KB - Last synced at: almost 2 years ago - Pushed at: about 7 years ago - Stars: 0 - Forks: 0
laderast/flowDashboard
Shiny Modules for visualizing flow cytometry data
Language: R - Size: 10.7 MB - Last synced at: 7 days ago - Pushed at: almost 7 years ago - Stars: 8 - Forks: 2
SangerCytometry/R-Scripts 📦
R scripts to help with your flow cytometry analysis. Batch index export and overlays
Language: R - Size: 2.4 MB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 1 - Forks: 2
whitews/ReFlow
Django-based Repository for Flow Cytometry Data
Language: JavaScript - Size: 8.62 MB - Last synced at: 17 days ago - Pushed at: about 6 years ago - Stars: 4 - Forks: 1