GitHub topics: icd-10
StefanoTrv/simple_icd_10_CM
A simple python library for ICD-10-CM codes
Language: Python - Size: 16.5 MB - Last synced at: about 24 hours ago - Pushed at: 1 day ago - Stars: 68 - Forks: 13
b2ihealthcare/snow-owl
:owl: Snow Owl Terminology Server - a production-ready, scalable, FHIR Terminology Service compliant server that supports SNOMED CT International and Extensions, LOINC, RxNorm, UMLS, ICD-10/11, custom code systems and many others
Language: Java - Size: 537 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 271 - Forks: 33
Cicatriiz/healthcare-mcp-public
A Model Context Protocol server providing AI assistants with access to healthcare data tools, including FDA drug information, PubMed research, health topics, clinical trials, and medical terminology lookup.
Language: Python - Size: 91.8 KB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 6 - Forks: 5
lowlysre/icd-10-cm
npm package of icd-10-cm data
Language: TypeScript - Size: 2 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 1 - Forks: 2
jackwasey/icd
*New maintainer/owner needed* Fast ICD-10 and ICD-9 comorbidities, decoding and validation in R. NB use main instead of master for default branch.
Language: R - Size: 72 MB - Last synced at: 5 days ago - Pushed at: 5 months ago - Stars: 245 - Forks: 62
RodrigoZepeda/WHOicd
R package to access the World Health Organization International Classification of Disease API
Language: R - Size: 5.22 MB - Last synced at: 4 days ago - Pushed at: 10 months ago - Stars: 6 - Forks: 0
wardle/hermes
A library and microservice implementing the health and care terminology SNOMED CT with support for cross-maps, inference, fast full-text search, autocompletion, compositional grammar and the expression constraint language.
Language: Clojure - Size: 1.48 MB - Last synced at: 6 days ago - Pushed at: about 2 months ago - Stars: 186 - Forks: 24
ropensci/coder
Classification of Cases into Deterministic Categories
Language: TeX - Size: 74.9 MB - Last synced at: 4 days ago - Pushed at: 23 days ago - Stars: 22 - Forks: 4
bennettoxford/opencodecounts
Clinical Code Usage Counts in England
Language: R - Size: 81.5 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 1 - Forks: 0
IBM/nlc-icd10-classifier
A simple web app that shows how Watson's Natural Language Classifier (NLC) can classify ICD-10 code. The app is written in Python using the Flask framework and leverages the Watson Developer Cloud Python SDK
Language: Python - Size: 4.37 MB - Last synced at: 22 days ago - Pushed at: about 2 years ago - Stars: 117 - Forks: 58
StefanoTrv/SimpleICD10-Java-edition
A simple Java library for ICD-10 codes
Language: Java - Size: 485 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 5 - Forks: 1
StefanoTrv/simple_icd_10
A simple python library for ICD-10 codes
Language: Python - Size: 3.95 MB - Last synced at: 28 days ago - Pushed at: 4 months ago - Stars: 43 - Forks: 5
TerminologyHub/open-termhub
Open source FHIR :fire: terminology service deployable as a simple docker container
Language: Java - Size: 2.65 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 0 - Forks: 0
wardle/codelists
Generate code lists using an expressive combination of SNOMED ECL, ICD-10 and ATC codes
Language: Clojure - Size: 66.4 KB - Last synced at: about 2 months ago - Pushed at: about 1 year ago - Stars: 14 - Forks: 0
baxtree/icd_code_converter
Convert between ICD-9 codes and ICD-10 codes
Language: Python - Size: 25.4 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 2 - Forks: 0
CamelotProject/who-icd-api-client
WHO ICD API Client for PHP
Language: PHP - Size: 25.4 KB - Last synced at: 22 days ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 0
finjahasi/clinical-text-mining_R_SCRIPT
A lightweight R script for text mining and harmonizing medical phenotype data. Cleans, standardizes, and maps diagnoses to ICD-10 codes, with clinical annotations for enhanced data usability.
Language: R - Size: 9.77 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
spiros/phemap
Functions to map between ICD-10 terms and PheCodes for UK Biobank hospital electronic health records
Language: Python - Size: 132 KB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 34 - Forks: 3
jcaperella29/clinical-text-mining_R_SCRIPT
A lightweight R script for text mining and harmonizing medical phenotype data. Cleans, standardizes, and maps diagnoses to ICD-10 codes, with clinical annotations for enhanced data usability.
Language: R - Size: 8.79 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0
ew55/icd-9-icd-10-lookup-and-conversion-csv
This repository contains lookup tables for the ICD-9 and ICD-10 diagnosis codes, in .csv format. It also contains a .csv table which classifies all ICD-9 codes using the ICD-10 codes' index. It includes the scripts to generate these tables, and the raw text which they are created from.
Language: Python - Size: 1.52 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 0
andrewallenbruce/procedural
Tidy ICD-10-PCS Interface :hospital:
Language: R - Size: 15.1 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 6 - Forks: 0
vinerya/ICD_10
Size: 639 KB - Last synced at: 1 day ago - Pushed at: 7 months ago - Stars: 0 - Forks: 0
dot-base/icd-10-api
Rest API to search the 10th revision of the International Statistical Classification of Diseases Database.
Language: TypeScript - Size: 2.19 MB - Last synced at: 7 months ago - Pushed at: 7 months ago - Stars: 18 - Forks: 4
TelethonKids/biometrics
R markdown templates based on Telethon Kid's style guide and helper functions/data.
Language: HTML - Size: 14.9 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 9 - Forks: 3
dneverson/HCCSearch
Searches a weighted problems list and is capable of adding, removing, and recommending problems for a patient when loaded into Centricity CPS 12.3 or higher. This will help providers determine higher weighted problems for patients.
Language: JavaScript - Size: 5.04 MB - Last synced at: 10 months ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0
JuliaHealth/ICD_GEMs.jl
ICD_GEMs.jl is a Julia package that allows to translate ICD-9 codes in ICD-10 and viceversa via the General Equivalence Mappings (GEMs) of the International Classification of Diseases (ICD).
Language: Julia - Size: 1.52 MB - Last synced at: 6 days ago - Pushed at: over 2 years ago - Stars: 17 - Forks: 3
data-intelligence-for-health-lab/ICD10-Unsupervised-Feature-Selection
Unsupervised Feature Selection to Identify Important ICD-10 Codes for Machine Learning
Language: Python - Size: 626 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 4 - Forks: 1
SmartMedicalCodex/smc-augmented-dataset
Conjunto de datos CIE-10 en español liberado para fines de investigación
Size: 441 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0
wenjie2wang/touch
Tools of Utilization and Cost in Healthcare
Language: R - Size: 4.62 MB - Last synced at: 16 days ago - Pushed at: almost 3 years ago - Stars: 13 - Forks: 1
TevvinStrong/stronghealth-ui
This is a EHR ICD10 Code reader
Language: TypeScript - Size: 255 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 0
spiros/chronological-map-phenotypes
Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.
Size: 1.4 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 45 - Forks: 40
nlpie-research/umls-to-snomed-icd10-mapper
UMLS to SNOMED CT and ICD-10 mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED CT or ICD-10 codes using the UMLS Metathesaurus. Supports exact match, broad relations, and parent-child hierarchy mapping methods.
Language: Python - Size: 8.79 KB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 7 - Forks: 0
Kirscher/TextMining_Parcours_de_soin
Offical repo of the paper "A novel methodological framework for the analysis of health trajectories and survival outcomes in heart failure patients" (ICLR 2024)
Language: HTML - Size: 39.3 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 1
OxfordIHTM/codigo
Interface to the International Classification of Diseases (ICD) API
Language: R - Size: 34.4 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
andrewallenbruce/pathologie
Tidy ICD-10-CM Interface :hospital:
Language: R - Size: 6.68 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0
NCBI-Hackathons/Design-of-ICD-9-to-10-conversion-function-for-the-R-package-icd
Develop a function to be incorporated into the R package 'icd' that will convert International Classification of Diseases codes from Ninth to Tenth revisions
Language: R - Size: 3.92 MB - Last synced at: 12 months ago - Pushed at: over 5 years ago - Stars: 17 - Forks: 4
bsenst/llm-reasoning
This experimental application serves an open source large language model Llama-2 that is connect to a streamlit user interface. The user can define a list of custom symptoms or ICD-10 symptoms as input to the LLM. A two-step chain of prompts will output a list of differential diagnoses followed by a list of examinations to workup these diagnoses.
Language: Python - Size: 35.2 KB - Last synced at: 2 months ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0
edonnachie/ICD10gm
R Package: ICD-10-GM Metadata
Language: R - Size: 38.9 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 9 - Forks: 1
innerNULL/PLM-ICD-multi-label-classifier
A multi-label classifier based on PLM-ICD paper
Language: Python - Size: 43 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0
samiaab1990/AHRQ-Quality-Indicators-CSV
Language: R - Size: 6.6 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 4 - Forks: 2
peterbyass/InterVA-5
files relating to evaluation of InterVA-5 software
Language: Stata - Size: 16.9 MB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 0
jgourassas/icd10cm
ICD10cm - ICD-10-PCS NDC Codes
Language: Elixir - Size: 33.3 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 1 - Forks: 0
prkskrs/icd-10-Version
I have scraped International Statistical Classification of Diseases and Related Health Problems 10th Revision websites's data. It has all the diseases and health problems. I have also attached csv of scraped data which contains two column "Ids" and "Description".
Language: Jupyter Notebook - Size: 41 KB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 8 - Forks: 0
mikkokotila/icd10
High Performance ICD10 (ICD-10) to Category Conversion for Python
Size: 3.91 KB - Last synced at: about 1 month ago - Pushed at: about 7 years ago - Stars: 2 - Forks: 0
suamin/ICD-BERT
ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)
Language: Python - Size: 17.6 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 61 - Forks: 16
deepdhungel/Charite-Projects-2017
MyWork
Language: Python - Size: 19.5 KB - Last synced at: 4 months ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 0
cghr-toronto/icd
Documentation for CGHR's processed ICD data from the WHO
Language: Jupyter Notebook - Size: 40.1 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 2 - Forks: 0
giovannicoppola/alfred-ICDbrowser
A browser for ICD codes
Language: Python - Size: 21.4 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
AsianZeus/Clinical-ICD10-Code-Prediction
This repository includes API to get ICD-10 codes from descriptions. The Model is a transformer based on BERT. The embeddings are being finetuned based on the following paper: https://arxiv.org/abs/1904.03323 .
Language: Python - Size: 9.77 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 7 - Forks: 2
thewillyhuman/snoicd-codex 📦
📚 Optimized search system for SNOMED CT & ICD API
Language: Java - Size: 4.33 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 4
janschneida/taxodist
Python library for similarity calculations in taxonomic hierarchies and the underlying concepts.
Language: HTML - Size: 6.51 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 0
tamycova/icd-cie-codes-chile
Tabular formats for diagnoses and procedures ICD and CIE codes, specifically the versions used in the GRD system in Chile. Scraped and downloaded from several sources.
Language: HTML - Size: 3.45 MB - Last synced at: about 2 years ago - Pushed at: about 4 years ago - Stars: 4 - Forks: 1
nphdang/WVM
Word2Vec based matching model for patient similarity matching
Language: R - Size: 4.88 KB - Last synced at: almost 2 years ago - Pushed at: over 8 years ago - Stars: 3 - Forks: 3
niekverw/ukpheno
Create binary traits for UKbio using ICD/OPER/medication/self reports/age of diagnosis/visit-dates etc). The current output includes variables on history, study visit, future, time-to-first-event, episode-duration. this is a starting point to construct your favorite trait in ukb. The code was written on the go, so not super clean code..
Language: R - Size: 64.7 MB - Last synced at: about 2 years ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 3
gbriddick/nysdoh_sepsisr
NYSDOH Sepsis Data Collection Data Processing Code
Language: R - Size: 45.9 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
westurner/pycd10api
REST API wrappers for ICD10 CM and PCS XML files (Pyramid + Cornice + lxml ) https://pypi.python.org/pypi/pycd10api
Language: Python - Size: 22.5 KB - Last synced at: 27 days ago - Pushed at: over 3 years ago - Stars: 10 - Forks: 1
ElliotY-ML/Predict_Diabetic_Patient_Hospitalization_Duration
Udacity AI for Healthcare Nanodegree Project: Predict Diabetic Patient Hospitalization Duration with Deep Learning Regression Model
Language: Jupyter Notebook - Size: 6.2 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
AberystwythSystemsBiology/MIMIC-III-to-SNOMED Fork of cscihkbu/Snomed-Proprocessed
Preprocessed SNOMED relations files that connect drugs and diagnoses from MIMIC-III to SNOMED. Fork of cscihkbu/Snomed-Proprocessed.
Size: 17.5 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
re-sirb/simple-ICD
A simple Python-library for encoding patient diagnoses according to ICD-10 (German Modification)
Language: Python - Size: 1.09 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
wenjie2wang/touchpy
Tools of Utilization and Cost in Healthcare in Python
Language: Python - Size: 83 KB - Last synced at: about 2 years ago - Pushed at: over 8 years ago - Stars: 2 - Forks: 0
xga0/sidericd10
Mapping drug information (DrugBank), side effects (The SIDER Side Effect Resource), and ICD-10 codes.
Language: Python - Size: 4.88 KB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
equipe22/ICDtimeliness
Language: R - Size: 489 KB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 1
