hydroshare/hydroshare

HydroShare is a collaborative website for better access to data and models in the hydrologic sciences.

Language: Python - Size: 269 MB - Last synced: about 12 hours ago - Pushed: about 15 hours ago - Stars: 173 - Forks: 34

wtsi-npg/valet

Automated data mangement for Oxford Nanopore DNA sequencing instruments

Language: Go - Size: 722 KB - Last synced: about 17 hours ago - Pushed: about 18 hours ago - Stars: 2 - Forks: 4

wtsi-npg/perl-irods-wrap

Perl iRODS Client Wrapper Library

Language: Perl - Size: 1.93 MB - Last synced: 4 days ago - Pushed: 4 days ago - Stars: 4 - Forks: 18

wtsi-npg/extendo

An extension to baton providing a Go API for iRODS (Integrated Rule-Oriented Data System)

Language: Go - Size: 431 KB - Last synced: 4 days ago - Pushed: 4 days ago - Stars: 0 - Forks: 2

UtrechtUniversity/irods-uu-microservices

Miscellaneous iRODS microservices developed or modified by Utrecht University.

Language: C++ - Size: 253 KB - Last synced: 6 days ago - Pushed: 6 days ago - Stars: 2 - Forks: 4

UtrechtUniversity/irods-rule-fuzzer

An experimental fuzzer for iRODS rules

Language: Python - Size: 21.5 KB - Last synced: 7 days ago - Pushed: 8 days ago - Stars: 0 - Forks: 0

jspijker/ricmd

R package for iRODS icommands

Language: R - Size: 3.89 MB - Last synced: 10 days ago - Pushed: 11 days ago - Stars: 0 - Forks: 1

irods/python-irodsclient

A Python API for iRODS

Language: Python - Size: 1010 KB - Last synced: 30 days ago - Pushed: about 1 month ago - Stars: 60 - Forks: 69

julianpistorius/jupyterlab_irods 📦

WARNING: This is not the latest version of the iRODS plugin. For the latest code: https://github.com/towicode/IJab

Language: TypeScript - Size: 82 KB - Last synced: 25 days ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

julianpistorius/irods-gooey

Demo of a graphical interface for a Python script that uploads files to IRODS

Language: Python - Size: 2.93 KB - Last synced: 25 days ago - Pushed: almost 4 years ago - Stars: 1 - Forks: 0

UtrechtUniversity/yoda-ruleset

iRODS ruleset and policies for Yoda: https://github.com/UtrechtUniversity/yoda

Language: Python - Size: 5.71 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 6 - Forks: 12

UtrechtUniversity/yoda-portal

Web portal for Yoda: https://github.com/UtrechtUniversity/yoda

Language: JavaScript - Size: 20.1 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 7 - Forks: 11

UtrechtUniversity/yoda

A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.

Language: HTML - Size: 42.2 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 40 - Forks: 25

iterate-ch/cyberduck

Cyberduck is a libre FTP, SFTP, WebDAV, Amazon S3, Backblaze B2, Microsoft Azure & OneDrive and OpenStack Swift file transfer client for Mac and Windows.

Language: Java - Size: 604 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 2,944 - Forks: 274

irods-contrib/metalnx-irods-test-connection

Metalnx JAR used to test connection with iRODS

Language: Java - Size: 31.3 KB - Last synced: about 2 months ago - Pushed: over 6 years ago - Stars: 1 - Forks: 0

irods-contrib/metalnx-web

Metalnx Web Application

Language: JavaScript - Size: 9.56 MB - Last synced: about 2 months ago - Pushed: about 1 year ago - Stars: 36 - Forks: 36

irods/irods_client_library_rirods

rirods R Package

Language: R - Size: 6.47 MB - Last synced: 26 days ago - Pushed: about 2 months ago - Stars: 6 - Forks: 6

UtrechtUniversity/irods-sudo-microservices

Empower users to execute operations typically reserved for iRODS administrators.

Language: C++ - Size: 64.5 KB - Last synced: 2 months ago - Pushed: 2 months ago - Stars: 0 - Forks: 1

UtrechtUniversity/iswitch

easy switching between iRODS iCommands configurations

Language: Python - Size: 35.2 KB - Last synced: 4 months ago - Pushed: about 3 years ago - Stars: 1 - Forks: 0

UtrechtUniversity/irods-offline-install

Offline installation of iRODS packages

Language: Shell - Size: 8.79 KB - Last synced: 4 months ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

UtrechtUniversity/icat-data-generator

synthetic data generator for testing iRODS iCAT database

Language: Python - Size: 35.2 KB - Last synced: 4 months ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 1

UtrechtUniversity/ii

ii - command-line utilities for iRODS

Language: Python - Size: 36.1 KB - Last synced: 4 months ago - Pushed: almost 3 years ago - Stars: 1 - Forks: 1

MaastrichtUniversity/irods-ruleset

Collection of rules for the iRODS infrastructure of DataHub Maastricht

Language: Python - Size: 1.42 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 3 - Forks: 3

bioteam/minio-irods-gateway

🔬Experimental Minio (S3) Gateway for iRODS 💾

Language: Go - Size: 37.1 KB - Last synced: 27 days ago - Pushed: over 4 years ago - Stars: 12 - Forks: 3

mesocentre-mcia/brocoli

Browse Collections for iRODS

Language: Python - Size: 185 KB - Last synced: 12 days ago - Pushed: about 2 months ago - Stars: 5 - Forks: 2

irods/irods_project_template_cpp_microservice_plugin

A project template for creating iRODS Microservice plugins using C++

Language: CMake - Size: 15.6 KB - Last synced: 29 days ago - Pushed: 6 months ago - Stars: 1 - Forks: 1

mjstealey/irods-icommands

iRODS iCommands in Docker - version 4.1.x and 4.2.x

Language: Shell - Size: 14.6 KB - Last synced: 7 months ago - Pushed: almost 6 years ago - Stars: 2 - Forks: 6

rbartelme/phenophasebbn

Sorghum Phenophase Bayesian Belief Network in R and Python

Language: Jupyter Notebook - Size: 1.08 GB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 2

Andries-B/Hamster

Cross-platform iRODS GUI client and metadata editor

Language: Python - Size: 166 KB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 3 - Forks: 5

sigau/easy_irods_commands

Easicmd is a user-friendly Python script that provides a graphical interface for interacting with irods. It simplifies the usage of icommands by generating intuitive commands, making it ideal for new users or individuals who prefer a graphical interface over the command line.

Language: Python - Size: 19.5 MB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 0

irods/irods_project_template_cpp_rule_engine_plugin

A project template for creating iRODS Rule Engine Plugins using C++

Language: Python - Size: 19.5 KB - Last synced: 29 days ago - Pushed: 6 months ago - Stars: 0 - Forks: 1

irods/irods_project_template_cpp_client

A project template for creating iRODS Clients using C++

Language: CMake - Size: 8.79 KB - Last synced: 29 days ago - Pushed: 6 months ago - Stars: 0 - Forks: 3

jacquayj/GoRODS 📦

Golang binding for iRODS C API: An iRODS client library written in Golang + C

Language: Go - Size: 5.8 MB - Last synced: 5 months ago - Pushed: about 1 year ago - Stars: 17 - Forks: 5

FAIReLABS/irods-executive-overview-2023

Introductory presentation on iRODS

Language: R - Size: 15.9 MB - Last synced: 11 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

irods-contrib/irods_tools_ingest 📦

Superseded by https://github.com/irods/irods_capability_automated_ingest

Language: Python - Size: 26.4 KB - Last synced: about 2 months ago - Pushed: about 6 years ago - Stars: 2 - Forks: 0

UtrechtUniversity/irods-json-microservices Fork of MaastrichtUniversity/irods-microservices 📦

Microservices developed for the RIT project

Language: C++ - Size: 18.6 KB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

UtrechtUniversity/irods-xml-microservices Fork of DICE-UNC/microservices 📦

Language: C++ - Size: 39.1 KB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

UtrechtUniversity/irods-ruleset-research 📦

This ruleset is deprecated and merged with https://github.com/UtrechtUniversity/irods-ruleset-uu

Language: R - Size: 1.33 MB - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 1 - Forks: 3

UtrechtUniversity/davrods

An Apache WebDAV interface to iRODS

Language: C - Size: 302 KB - Last synced: 10 months ago - Pushed: 10 months ago - Stars: 20 - Forks: 11

UtrechtUniversity/irods-consistency-check

Check consistency between irods resource and on-disk vault.

Language: Python - Size: 106 KB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 2 - Forks: 3

jjacquay712/irods-ugm-2017

Resources for iRODS UGM 2017 talk/demo

Language: Go - Size: 43.6 MB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 1 - Forks: 0

seanlaidlaw/iRODS-Downloader

Wrapper program for hassle-free downloading and realigning of sequencing data from iRODS on a cluster

Language: Go - Size: 58.6 KB - Last synced: 9 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

mjstealey/irods-provider-postgres

iRODS catalog provider in Docker - PostgreSQL ICAT - versions 4.1.x and 4.2.x

Language: Shell - Size: 63.5 KB - Last synced: about 1 year ago - Pushed: almost 5 years ago - Stars: 10 - Forks: 10

hurngchunlee/docker-irods

iRODS Docker Containers

Language: Shell - Size: 26.4 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 2 - Forks: 2

VEuPathDB/EuPathDBIrods

Language: C++ - Size: 16.8 MB - Last synced: 11 days ago - Pushed: 11 days ago - Stars: 0 - Forks: 0

mjstealey/singularity-irods-icommands

Singularity iRODS: iCommands

Language: Shell - Size: 12.7 KB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 2 - Forks: 1

UtrechtUniversity/vagrant-irods

Vagrant configurations for iRODS

Language: Shell - Size: 72.3 KB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 1 - Forks: 1

irods-contrib/metalnx-msi

Metalnx Micro Services for iRODS

Language: C++ - Size: 12.9 MB - Last synced: about 2 months ago - Pushed: about 6 years ago - Stars: 4 - Forks: 4

EUDAT-B2STAGE/http-api

RESTful HTTP-API for the B2STAGE service inside the EUDAT project

Language: Python - Size: 5.61 MB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 7 - Forks: 7

wtsi-hgi/docker-icat

iRODS server in a Docker container

Language: Shell - Size: 49.8 KB - Last synced: 29 days ago - Pushed: about 7 years ago - Stars: 1 - Forks: 1

UtrechtUniversity/icat-database-checker

script to check the iRODS ICAT database for inconsistencies and unusual situations

Language: Python - Size: 58.6 KB - Last synced: about 2 months ago - Pushed: about 2 months ago - Stars: 0 - Forks: 1

mjstealey/irods-consumer

iRODS catalog consumer in Docker - versions 4.1.x and 4.2.x

Language: Shell - Size: 29.3 KB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 2 - Forks: 4

wtsi-hgi/irodsa-utilities

Convenience scripts for reading/creating the contents of .irodsA files

Language: Python - Size: 19.5 KB - Last synced: 29 days ago - Pushed: almost 8 years ago - Stars: 1 - Forks: 1

MaastrichtUniversity/irods_avu_json-ruleset

Rules, policies and microservices for the bidirectional conversion between iRODS AVUs and JSON(-LD)

Language: Python - Size: 38.1 KB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 1

githubfoam/irods-sandbox

irods travisci

Size: 32.2 KB - Last synced: 12 months ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

mjstealey/irods-provider-galera

iRODS v.4.2.x provider with ICAT backend in MariaDB Galera cluster

Language: Shell - Size: 6 MB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 1 - Forks: 1

whitwham/tears

Stream files to and from iRODS

Language: C - Size: 43.9 KB - Last synced: about 1 year ago - Pushed: almost 4 years ago - Stars: 1 - Forks: 5

wtsi-hgi/irods-to-s3

iRODS to S3 copy tool

Language: Python - Size: 37.1 KB - Last synced: 29 days ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

sara-nl/dmp_feature_matrix

Data Management platform features and evaluation criterion

Size: 139 KB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 2 - Forks: 1

RENCI/docker-davrods

An Apache WebDAV interface to iRODS in Docker

Language: Shell - Size: 40 KB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 1 - Forks: 3

wtsi-hgi/singularity-baton

baton, contained

Language: Shell - Size: 32.2 KB - Last synced: 29 days ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

beheerderdag/experiment

iRODS experiments, comparisons, tools etc

Language: R - Size: 35.2 KB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 0 - Forks: 1

wtsi-hgi/imirror

Copy a directory to iRODS and distribute the work over an LSF cluster

Language: Shell - Size: 53.7 KB - Last synced: 29 days ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

SciDAS/lmod-modules-centos

Lmod module packages for CentOS 7

Language: Shell - Size: 171 MB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

agaveplatform/allow-agave-connections

Sync your existing iptables rule to allow connections from the Agave Platform based on the current ip addresses of the Agave's hosting.

Language: Shell - Size: 4.88 KB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

RENCI/summa-davrods

SUMMA hydrologic modeling approach using an iRODS backend via DavRODS

Language: Shell - Size: 19.8 MB - Last synced: about 1 year ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

wtsi-hgi/irobot

iRODS data brokerage service

Language: Python - Size: 688 KB - Last synced: 29 days ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

CyVerse-Ansible/ansible-irods-env

This Ansible role creates irods_environment.json files for both iRODS clients and servers.

Size: 42 KB - Last synced: about 1 year ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

wtsi-hgi/test-with-irods

Deprecated: Use https://github.com/wtsi-hgi/useintest/ instead

Language: Python - Size: 71.3 KB - Last synced: 29 days ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

samuell/irods-rulelang-cheatsheet

A HTML cheat sheet for the iRODS rule language

Language: HTML - Size: 625 KB - Last synced: about 1 year ago - Pushed: about 9 years ago - Stars: 1 - Forks: 1

wtsi-hgi/python-baton-wrapper

Python 3 wrapper for baton

Language: Python - Size: 282 KB - Last synced: 23 days ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0