GitHub topics: morphology-analysis
tengjuilin/vampire-analysis
VAMPIRE (Visually Aided Morpho-Phenotyping Image Recognition) analysis quantifies and visualizes heterogeneity of cell and nucleus morphology.
Language: Python - Size: 4.16 MB - Last synced at: 11 days ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 1

amatov/NeurodegenerationMitochondriaLysosomes
Language: MATLAB - Size: 26.3 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

amatov/DataSetTracker
DataSet Tracker is a software suite for real-time image analysis designed to run on personal computers, smartphones, and smart glasses hardware and suitable for resource-constrained computing
Language: C# - Size: 145 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

BlueBrain/NeuroMorphoVis
A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of neuronal morphology skeletons extracted from microscopy stacks.
Language: Python - Size: 133 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 138 - Forks: 28

DanuserLab/u-unwrap3D
Transform 3D cell surfaces into different representations including topographic maps, 3D spheres, and 2D images for doing optimized quantification, data analysis and machine learning.
Language: Jupyter Notebook - Size: 52.7 MB - Last synced at: 16 days ago - Pushed at: 3 months ago - Stars: 29 - Forks: 2

mssrchapelier/tigre-parser
A rule-based morphological analyser for Tigre (Eritrea) in Java (bachelor's thesis, 2019, refactored 2021).
Language: Java - Size: 18.3 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

BlueBrain/TMD 📦
A python package for the topological analysis of neurons.
Language: Python - Size: 462 KB - Last synced at: about 21 hours ago - Pushed at: 6 months ago - Stars: 28 - Forks: 23

DanuserLab/u-shape3D
Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces.
Language: MATLAB - Size: 107 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 29 - Forks: 6

DanuserLab/u-signal3D
The computational platform u-signal3D defines a shape-invariant representation of the spatial scales of molecular organization at the cell surface, enabling comparison and machine-learning of signaling across morphologically diverse cell populations.
Language: MATLAB - Size: 100 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 10 - Forks: 2

StructuralNeurobiologyLab/SyConn
Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.
Language: Python - Size: 256 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 41 - Forks: 9

SandraSSB/MACROglia_cell-morphology-analysis
ImageJ macro for morphological analysis
Language: ImageJ Macro - Size: 28.9 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0

osharma08/ovarian_cancer_morphology
Ovarian cancer cell line in coculture with fibroblasts cell line: morphology analysis
Language: Jupyter Notebook - Size: 53.4 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

hugojal/Applying-Topological-Data-Analysis-to-Alzheimer-s-Disease-Diagnosis-from-MRI
Hello! We are an international group of students researching deep learning applications for Alzheimer's disease. We aim to introduce a better model for AD diagnosis. Our names are Hugo Jal Hernández, Ravi Shah, Parth Parik.
Language: Python - Size: 1.14 MB - Last synced at: 12 months ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0

hansenjn/MotiQ
A set of ImageJ plugins to quantify dynamics, morphology, and fluorescence of microglial cells.
Language: Java - Size: 7.93 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 5 - Forks: 0

super16/telegram-pymorphy-bot
Linguistics morphological analysis for russian words in Telegram
Language: Python - Size: 62.5 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

fiorin7/words-flask
Prototype of a digital Latin-Bulgarian dictionary with morphological analysis.
Language: CSS - Size: 862 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 1

syntpump/declensor
Library for word declension
Language: Python - Size: 38.1 KB - Last synced at: 22 days ago - Pushed at: over 6 years ago - Stars: 5 - Forks: 1

Rj7/NMT-for-morphologically-rich-languages
Neural Machine Translation for Morphologically rich languages - Report
Language: TeX - Size: 1.71 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0

EvidentSolutions/elasticsearch-analysis-raudikko
Finnish language analysis for Elasticsearch using Raudikko
Language: Java - Size: 114 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 9 - Forks: 6

EvidentSolutions/raudikko
Morphological analysis of Finnish language for Java
Language: Java - Size: 3.91 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 11 - Forks: 2

aksel-blaise/bottle.traj
Patterns of shape change in Caddo bottle morphology.
Language: HTML - Size: 31 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

aksel-blaise/perdiz 📦
Analysis of Perdiz arrow point morphology reveals differences in shape as a function of time, raw material, and burial context.
Language: HTML - Size: 91.9 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

zoobereq/genusidator
A Rule-Based System to Explain Grammatical Gender Assignment in German Nouns
Language: Python - Size: 6.32 MB - Last synced at: 3 months ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 0

Akshayanti/Masters-Thesis-CUNI-2020 📦
Experimental Data and Annotations for Master's Thesis as submitted to CUNI in July 2020
Language: Python - Size: 441 MB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

Tiendil/morphologic
morphological analysis tool: https://tiendil.github.io/morphologic/
Language: Vue - Size: 2.49 MB - Last synced at: over 2 years ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 1

Orthogonal-Research-Lab/Developmental-Incongruities-and-Heterochrony
Language: Jupyter Notebook - Size: 5.61 MB - Last synced at: over 2 years ago - Pushed at: about 5 years ago - Stars: 0 - Forks: 2
