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GitHub topics: parsimony

starsareintherose/TNT_Script

One-step TNT script for maximum parsimony phylogenetic analysis https://doi.org/10.11646/zootaxa.5642.1.10

Language: C++ - Size: 75.2 KB - Last synced at: 3 days ago - Pushed at: 3 months ago - Stars: 6 - Forks: 0

evolbioinfo/pastml

Ancestral character reconstruction and visualisation for rooted phylogenetic trees

Language: Python - Size: 35.9 MB - Last synced at: 5 days ago - Pushed at: 3 months ago - Stars: 35 - Forks: 6

sourdough/starter

www starter 🦕

Language: JavaScript - Size: 264 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 2 - Forks: 2

DarkenedFlames/gmgcode

Welcome to the master repository for gmgcode.

Language: Python - Size: 281 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 1 - Forks: 0

molloy-lab/Dollo-CDP

Phylogeny estimation from binary characters via Dollo parsimony

Language: C++ - Size: 110 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 4 - Forks: 0

piazzai/piazzai

GitHub profile

Size: 4.88 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

molloy-lab/Star-CDP

Cell lineage tree estimation via Star Homoplasy parsimony; also applicable to Camin-Sokal parsimony with binary characters

Language: C++ - Size: 119 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

hosszu/2024_Evolution_of_Scripts

Evolution of Scripts

Size: 649 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

nluhmann/PhySca

SCJ small parsimony problem for weighted gene adjacencies

Language: Python - Size: 110 KB - Last synced at: over 1 year ago - Pushed at: about 8 years ago - Stars: 1 - Forks: 0

kwoehrer/UPGMA-Phylogeny-Parsimony

UPGMA Trait-Based Phlyogenetic Tree Generator With Optional Parsimony Capabilities

Language: Java - Size: 250 KB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 0

guyleonard/orthomcl_tools

A couple of tools I find indispensable for post orthomcl down-stream analysis.

Language: Perl - Size: 39.1 KB - Last synced at: almost 2 years ago - Pushed at: almost 6 years ago - Stars: 11 - Forks: 3

ms609/ExploreInapplicable

Tests to explore the use of the inapplicable algorithm of Brazeau, Guillerme & Smith (2019)

Language: HTML - Size: 60.4 MB - Last synced at: 6 months ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

saishsali/cse549

Computational Biology Assignments

Language: Python - Size: 21.5 KB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 1