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GitHub topics: qsar-models

pritampanda15/Drug-Designing

Drug Discovery Methods | Drug Designing Pipelines

Language: Jupyter Notebook - Size: 142 MB - Last synced at: about 6 hours ago - Pushed at: 6 months ago - Stars: 1 - Forks: 1

aminuldu07/SENDQSARpy

SENDQSARpy package facilitates developing Quantitative Structure-Activity Relationship (QSAR) models using the SEND database. It streamlines data acquisition, preprocessing, descriptor calculation, and model evaluation, enabling researchers to efficiently explore molecular descriptors and create robust predictive models.

Language: Jupyter Notebook - Size: 5.52 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 0 - Forks: 0

althonos/peptides.py

Physicochemical properties, indices and descriptors for amino-acid sequences.

Language: Python - Size: 236 KB - Last synced at: 3 days ago - Pushed at: about 1 month ago - Stars: 93 - Forks: 13

Ethisak/IR-Fingerprint

Prediction of physicochemical properties using molecular fingerprints based on MIR spectra.

Language: Python - Size: 606 KB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 0 - Forks: 0

meenub-18/ML

Machine Learning for Scientific coding

Language: Jupyter Notebook - Size: 272 KB - Last synced at: 25 days ago - Pushed at: 25 days ago - Stars: 0 - Forks: 0

yasminenahal/hitl-al-gomg

Active learning workflow to train and fine-tune molecular property predictors with chemist feedback for goal-oriented molecule generation.

Language: Jupyter Notebook - Size: 1.46 GB - Last synced at: 4 days ago - Pushed at: 25 days ago - Stars: 14 - Forks: 1

MolecularAI/QSARtuna

QSARtuna: QSAR model building with the optuna framework

Language: Jupyter Notebook - Size: 106 MB - Last synced at: about 2 months ago - Pushed at: 7 months ago - Stars: 115 - Forks: 17

hydrodynamicstability/publicationlist

C. Tong List of Selected Publications & Abstracts

Size: 12.6 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0

derekgan08/QSAR-biodegradability-prediction

Predicting biodegradability using QSAR models with K-Nearest Neighbors, Decision Tree, Neural Network, Logistic Regression

Language: Jupyter Notebook - Size: 3.53 MB - Last synced at: 3 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

emmelievanderveer/ACMDD

Code used in the elective course Advanced Computational Methods in Drug Discovery: AI and Physics-Based Simulations at Leiden University.

Language: Jupyter Notebook - Size: 39.5 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

NikhilMukraj/mod-qsar

A modular inverse QSAR pipeline

Language: Python - Size: 20.1 MB - Last synced at: 3 days ago - Pushed at: 9 months ago - Stars: 5 - Forks: 0

RollerCoaster1899/AutoQSAR

Automatic QSAR workflow for Python

Language: Python - Size: 164 MB - Last synced at: 9 months ago - Pushed at: 12 months ago - Stars: 0 - Forks: 0

D-Cru/NoiseEstimator

Estimate maximum performance bounds based on experimental errors for ML datasets

Language: Jupyter Notebook - Size: 1.77 MB - Last synced at: 7 days ago - Pushed at: 12 months ago - Stars: 1 - Forks: 1

MolecularAI/MMP_project 📦

Code for paper

Language: Jupyter Notebook - Size: 9.67 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 5 - Forks: 1

cpayal/caddtools

A one stop destination of open source tools in Computer Aided Drug Design (CADD)

Language: JavaScript - Size: 9.57 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

cptbern/QSAR_DILI_2019

Training data for "Prediction of clinically relevant drug-induced liver injury from structure using machine learning" (Hammann et al., J Appl Toxicol . 2019 Mar;39(3):412-419)

Size: 3.33 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 3 - Forks: 0

KISysBio/modSAR

Source code for the paper Cardoso-Silva, J., Papageorgiou, L. G. & Tsoka, S. (2019) Network-based piecewise linear regression for QSAR modelling. http://link.springer.com/10.1007/s10822-019-00228-6

Language: Jupyter Notebook - Size: 70.5 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 1

ALescoulie/QSAR-monomer-reactivity-prediction

Research project predicting monomer pair reactivity ratios with QSAR models based on the U-V scheme and quantum chemical descriptors.

Language: Jupyter Notebook - Size: 4.33 MB - Last synced at: almost 2 years ago - Pushed at: almost 4 years ago - Stars: 2 - Forks: 1

trizkynoviandy/qsar-bace1

Classify beta-secretase 1 inhibitor with ensemble machine learning algorithms

Language: Jupyter Notebook - Size: 552 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

quantaosun/QSAR-COVID-19

Open Source, machine learning QSAR model with public data or your local data, The model utilises molecular descriptors as the independent variable, bioactivity as the dependent variable, random forest as a mathematical model.

Language: Jupyter Notebook - Size: 403 KB - Last synced at: about 1 year ago - Pushed at: almost 2 years ago - Stars: 4 - Forks: 3

glezdiazh/MCDCALC

MCDCalc: Calculation of Markov Singular Values Molecular Descriptors Online Tool

Language: Java - Size: 21.5 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 1

kunaL9804/QSAR-Modelling

Developing a regression-based QSAR (quantitative structure-activity relationships) model to identify compounds that have 3-chymotrypsin-like protease (3CLpro) inhibitory activity.

Language: Jupyter Notebook - Size: 1.35 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 1

shubhahegde2002/LC50-toxicity-predictor-app-Using-Machine-Learning-and-QSAR-Modeling

Quantitative structure activity relationship models (QSAR models) using 6 molecular descriptors of 908 chemicals to predict quantitative acute aquatic toxicity (LC50 value) towards the fish Pimephales promelas (fathead minnow).

Language: Jupyter Notebook - Size: 2.77 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 2 - Forks: 1

Related Keywords
qsar-models 23 machine-learning 11 qsar 8 python 5 drug-discovery 4 cheminformatics 4 drug-design 3 computational-chemistry 2 neural-network 2 ml 2 chemoinformatics 2 decision-tree 2 keras 2 mysql 1 tanimotosimilarity 1 non-additive-effects 1 matched-molecular-pair 1 noise 1 dataset 1 chemistry 1 virtual-screening 1 computational-biology 1 rdkit 1 pca 1 julia 1 maccs-fingerprint 1 ecfp4 1 chembl-web-client 1 tensorflow2 1 python3 1 pharmacokinetics 1 keras-tensorflow 1 jinja 1 heroku 1 front-end-development 1 flask 1 database 1 regression-models 1 random-forest 1 modelling 1 covid-19 1 qsar-qspr-qstr 1 molecular-descriptors 1 covid19-data 1 chembl 1 ensemble-learning 1 classification 1 bace-1 1 modularity 1 mixed-integer-programming 1 complex-networks 1 pharmacology 1 molecular-dynamics 1 enhanced-sampling 1 cheminformatics-and-compchem 1 drug-likeness 1 chemprop 1 molecule-generation 1 human-in-the-loop 1 active-learning 1 supervised-learning 1 machine-learning-algorithms 1 drug-target-interactions 1 deep-learning 1 r 1 fingerprint 1 sequence-analysis 1 pure-python 1 protein 1 bioinformatics 1 send-database 1 liver-toxicity-prediciton 1 structure 1 modeling-and-simulation 1 modeling 1 drug-repurposing 1 drug 1 cadd 1 docking 1 clustering 1 logistic-regression 1 k-nearest-neighbours 1 biodegradability 1 veterinary-microbiology 1 statistics 1 physics 1 nonlinear-dynamics 1 mass-spectrometry 1 machinelearning 1 imaging 1 hydrodynamics 1 gyrostat 1 atmospheric-science 1 acoustics 1 uncertainty-estimation 1 peptide-modelling 1 optuna 1 hyperparameter-optimization 1 explainability 1 compchem 1