GitHub topics: scalebar

Repositories

lukmuk/em-scalebartools

Fiji/ImageJ macros to quickly add a scale bar to an (electron microscopy) image.

Language: ImageJ Macro - Size: 60.2 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 12 - Forks: 1

danscotson/ScaleBarIT

User interface to add customisable scale bars to images.

Size: 9.84 MB - Last synced at: 9 days ago - Pushed at: 4 months ago - Stars: 2 - Forks: 0

ppinard/matplotlib-scalebar

Provides a new artist for matplotlib to display a scale bar, aka micron bar.

Language: Python - Size: 1.28 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 148 - Forks: 29

lauraluebbert/confocal_z-stack_analysis

Imaging experiments in Biology often involve the acquisition of confocal z-stack images to quantify fluorescent signal in a biological sample. These z-stacks are usually analyzed using open-source programs such as FIJI, which are notoriously frustrating to work with, and do not facility intuitive high-throughput analysis of many images at once. Manual image analysis is labor-intensive, time-consuming, and prone to human error. I compiled two notebooks to streamline two of the most commonly performed tasks in the analysis of confocal z-stack images: the generation of "pretty" maximum projections, and the analysis of pixel values/ fluorescence from sum projections.

Language: Jupyter Notebook - Size: 177 KB - Last synced at: 10 days ago - Pushed at: almost 3 years ago - Stars: 5 - Forks: 4