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GitHub topics: segmental-duplications

0xTCG/biser

A fast tool for detecting and decomposing segmental duplications in genome assemblies

Language: Jupyter Notebook - Size: 17.5 MB - Last synced at: 4 days ago - Pushed at: about 1 year ago - Stars: 48 - Forks: 0

vpc-ccg/sedef

Identification of segmental duplications in the genome

Language: C++ - Size: 20.7 MB - Last synced at: 6 months ago - Pushed at: about 3 years ago - Stars: 26 - Forks: 8

redndgreen8/hmcnc

Hidden Markov Model based Copy number caller

Language: Python - Size: 28.3 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 5 - Forks: 1

UdeM-LBIT/SuperReconciliation

Implementation of the Super-Reconciliation model for reconciling a set of trees accounting for segmental duplications and losses.

Language: C++ - Size: 3.49 MB - Last synced at: 12 months ago - Pushed at: over 6 years ago - Stars: 3 - Forks: 1