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GitHub topics: trajectory-inference-methods

KChen-lab/Cyclum

Identify circular trajectories in scRNA-seq data using an autoencoder with sinusoidal activations

Language: Python - Size: 129 MB - Last synced at: 2 months ago - Pushed at: over 3 years ago - Stars: 22 - Forks: 4

dynverse/dynmethods

A collection of 50+ trajectory inference methods within a common interface 📥📤

Language: R - Size: 18.9 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 114 - Forks: 26

dynverse/dynverse

A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. 🌍

Language: R - Size: 566 KB - Last synced at: about 1 year ago - Pushed at: about 4 years ago - Stars: 71 - Forks: 17

Related Keywords
single-cell-rna-seq 3 trajectory-inference-methods 3 artifical-neural-network 1 latent-process-inference 1 bioinformatics-algorithms 1 pseudotemporal-ordering 1 single-cell-analysis 1 trajectory-inference 1 benchmarking 1 scrna-seq 1 single-cell 1 single-cell-omics 1