insilichem/pychimera

Use UCSF Chimera Python API in a standard interpreter

Language: Python - Size: 1.42 MB - Last synced: 22 days ago - Pushed: about 5 years ago - Stars: 54 - Forks: 10

insilichem/gaudiview

UCSF Chimera extension to explore and analyze GaudiMM & GOLD solutions

Language: Python - Size: 288 KB - Last synced: 7 months ago - Pushed: over 2 years ago - Stars: 4 - Forks: 3

insilichem/tangram

:black_square_button::atom_symbol: A collection of molecular modelling tools for UCSF Chimera

Language: Shell - Size: 685 KB - Last synced: 7 months ago - Pushed: about 5 years ago - Stars: 16 - Forks: 3

insilichem/tangram_bondorder

Bond order perception extension for UCSF Chimera [WIP]

Language: Python - Size: 26.4 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 1 - Forks: 0

insilichem/tangram_plipgui

Depict protein-ligand interactions, as calculated with PLIP, in UCSF Chimera

Language: Python - Size: 36.1 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 3 - Forks: 3

insilichem/tangram_mmsetup

A graphical interface to run OpenMM simulations in UCSF Chimera.

Language: Python - Size: 117 KB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 2 - Forks: 0

insilichem/tangram_subalign

Align two, potentially different, molecules based on partial matches of substructures in UCSF Chimera

Language: Python - Size: 27.3 KB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 2 - Forks: 1

insilichem/tangram_qmsetup

QM and QM/MM calculations setup for UCSF Chimera

Language: Python - Size: 5.25 MB - Last synced: about 1 year ago - Pushed: over 3 years ago - Stars: 0 - Forks: 2

insilichem/tangram_nciplot

Setup calculations for NCIPlot and visualize them in UCSF Chimera

Language: Python - Size: 340 KB - Last synced: about 1 year ago - Pushed: about 4 years ago - Stars: 2 - Forks: 0

ravila4/RIVEM-chimera-plugin

RIVEM software plugin for UCSF Chimera

Language: Python - Size: 23.1 MB - Last synced: over 1 year ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

insilichem/tangram_taladraw

2D to 3D constructor using BKChem drawing engine

Language: Python - Size: 46.9 KB - Last synced: about 1 year ago - Pushed: about 5 years ago - Stars: 0 - Forks: 0

insilichem/tangram_vinarelaunch

Easily relaunch failed AutoDock Vina OPAL jobs from UCSF Chimera

Language: Python - Size: 22.5 KB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

insilichem/tangram_snfg

3D implementation of The Symbol Nomenclature For Glycans (SNFG) for UCSF Chimera

Language: Python - Size: 488 KB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

insilichem/tangram_selection

Experimental Tk widget to select items in UCSF Chimera a la Excel

Language: Python - Size: 30.3 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

insilichem/tangram_propkagui

Analyze and depict the expected pKa values of protein residues with PropKa 3.1 and view them in UCSF Chimera

Language: Python - Size: 43.9 KB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

insilichem/tangram_popmusicgui

Depict and apply the predictions made by PoPMuSiC calculations in UCSF Chimera

Language: Python - Size: 51.8 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

insilichem/tangram_orbitraj

Modification of UCSF Chimera's MD Movie extension to play volumetric data

Language: Python - Size: 141 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

insilichem/tangram_normalmodes

Perform Normal Modes Analysis and view them directly on-screen with UCSF Chimera

Language: Python - Size: 86.9 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

insilichem/libtangram

Common code for all Tangram extensions

Language: Python - Size: 35.2 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

insilichem/tangram_dummyatoms

Language: Python - Size: 168 KB - Last synced: about 1 year ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0