Topic: "bioformats"
andreped/vsi2tif
Simple tool for converting WSIs from cellSens VSI to pyramidal TIFF
Language: Jupyter Notebook - Size: 604 KB - Last synced at: 6 days ago - Pushed at: 3 months ago - Stars: 19 - Forks: 5
nf-core/mcmicro
An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.
Language: Nextflow - Size: 2.94 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 10 - Forks: 16
Ebola-Chan-bot/Image5D
5D图像读写库，全网最快第三方OIR读入器
Language: C++ - Size: 16.5 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 8 - Forks: 1
yfukai/pycziutils 📦
A tiny utility module to parse Zeiss CZI files in Python through python-bioformats.
Language: Python - Size: 8.73 MB - Last synced at: 3 days ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
bwmr/vsi2tif
Take Olympus vsi stacks. Bleach-correct, write out ome-tiff. Save clicks.
Language: Python - Size: 14.6 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0
tlambert03/bioformats_jar 📦
(deprecated) meta-package to import bioformats_jar from scyjava
Language: Python - Size: 39.1 MB - Last synced at: 2 days ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
