An open API service providing repository metadata for many open source software ecosystems.

Topic: "brain-imaging"

nilearn/nilearn

Machine learning for NeuroImaging in Python

Language: Python - Size: 67.9 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 1,305 - Forks: 630

nipy/nipype

Workflows and interfaces for neuroimaging packages

Language: Python - Size: 75.6 MB - Last synced at: 5 days ago - Pushed at: 20 days ago - Stars: 792 - Forks: 536

nipy/nibabel

Python package to access a cacophony of neuro-imaging file formats

Language: Python - Size: 17.8 MB - Last synced at: 3 days ago - Pushed at: 6 days ago - Stars: 725 - Forks: 266

nipreps/fmriprep

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

Language: HTML - Size: 152 MB - Last synced at: 5 days ago - Pushed at: 8 days ago - Stars: 687 - Forks: 307

mikeroyal/Neuromorphic-Computing-Guide

Learn about the Neumorphic engineering process of creating large-scale integration (VLSI) systems containing electronic analog circuits to mimic neuro-biological architectures.

Language: Python - Size: 926 KB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 456 - Forks: 63

netneurolab/neuromaps

A toolbox for comparing brain maps

Language: Python - Size: 2.47 MB - Last synced at: 2 days ago - Pushed at: 5 months ago - Stars: 299 - Forks: 62

adamkwolf/3d-nii-visualizer

A NIfTI (nii.gz) 3D Visualizer using VTK and Qt5

Language: Python - Size: 161 MB - Last synced at: 3 months ago - Pushed at: about 1 year ago - Stars: 177 - Forks: 32

aramis-lab/clinicadl

Framework for the reproducible processing of neuroimaging data with deep learning methods

Language: Python - Size: 128 MB - Last synced at: 1 day ago - Pushed at: 3 days ago - Stars: 174 - Forks: 60

ME-ICA/tedana

TE-dependent analysis of multi-echo fMRI

Language: Python - Size: 111 MB - Last synced at: 3 days ago - Pushed at: 12 days ago - Stars: 174 - Forks: 100

cwatson/brainGraph

Graph theory analysis of brain MRI data

Language: R - Size: 5.65 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 159 - Forks: 46

nipy/mindboggle

Automated anatomical brain label/shape analysis software (+ website)

Language: Python - Size: 36.9 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 142 - Forks: 54

NeuroVault/NeuroVault

Easy to use web database for statistical maps.

Language: Python - Size: 190 MB - Last synced at: about 1 month ago - Pushed at: 3 months ago - Stars: 105 - Forks: 71

PolarBean/DeepSlice

A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.

Language: Python - Size: 28.5 MB - Last synced at: 20 days ago - Pushed at: 20 days ago - Stars: 104 - Forks: 23

ai-med/quickNAT_pytorch

PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty

Language: Python - Size: 342 MB - Last synced at: 2 months ago - Pushed at: over 4 years ago - Stars: 104 - Forks: 37

NSBLab/BrainEigenmodes

Code supporting 'Geometric constraints on human brain function'

Language: MATLAB - Size: 155 MB - Last synced at: 4 months ago - Pushed at: 5 months ago - Stars: 97 - Forks: 17

templateflow/templateflow

The TemplateFlow Archive - A DataLad super-dataset

Size: 46.5 MB - Last synced at: 18 days ago - Pushed at: 25 days ago - Stars: 86 - Forks: 16

netneurolab/netneurotools

Useful tools from the Network Neuroscience Lab

Language: Python - Size: 648 KB - Last synced at: about 8 hours ago - Pushed at: about 1 month ago - Stars: 78 - Forks: 35

ColeLab/ColeAnticevicNetPartition

Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)

Language: C - Size: 117 MB - Last synced at: 10 months ago - Pushed at: over 4 years ago - Stars: 65 - Forks: 20

zhengyang-wang/Unet_3D

3D Unet Equipped with Advanced Deep Learning Methods

Language: Python - Size: 509 KB - Last synced at: about 2 years ago - Pushed at: almost 6 years ago - Stars: 61 - Forks: 15

arttumiettinen/pi2

C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.

Language: C++ - Size: 4.96 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 54 - Forks: 16

Mentalab-hub/explorepy

Python API for Mentalab biosignal aquisition devices

Language: Python - Size: 9.43 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 51 - Forks: 21

jondeaton/BraTS18-Project

Brain tumor segmentation using fully-convolutional deep neural networks.

Language: Python - Size: 50.3 MB - Last synced at: over 2 years ago - Pushed at: about 7 years ago - Stars: 51 - Forks: 19

razvanmarinescu/brain-coloring

BrainPainter - Brain Visualisation Software

Language: Python - Size: 456 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 49 - Forks: 17

ubamba98/Brain-Segmentation

Brain Segmentation on MRBrains18

Language: Python - Size: 35.8 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 45 - Forks: 15

NatLee/nipype-preprocess-on-brain-MR

The project is used to do preprocessing on brain MR images by using Nipype.

Language: Python - Size: 3.63 MB - Last synced at: about 2 months ago - Pushed at: about 1 year ago - Stars: 37 - Forks: 7

plotly/dash-brain-surface-viewer

Dash app for viewing brain surfaces saved as MNI files. Data from https://github.com/aces/brainbrowser

Language: Python - Size: 10.4 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 35 - Forks: 15

volBrain/AssemblyNet

AssemblyNet: 3D Whole Brain MRI segmentation pipeline

Size: 53.4 MB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 34 - Forks: 6

IAmSuyogJadhav/Brainy

Brainy is a virtual MRI analyzer. Just upload the MRI scan file and get 3 different classes of tumors detected and segmented. In Beta.

Language: Python - Size: 195 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 33 - Forks: 13

vaibhavshukla182/Brain-MRI-Segmentation

Smart India Hackathon 2019 project given by the Department of Atomic Energy

Language: Python - Size: 6.76 MB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 33 - Forks: 13

brainlife/ezbids

A web service for semi-automated conversion of raw imaging data to BIDS

Language: Vue - Size: 10.6 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 31 - Forks: 16

tractor/tractor

Magnetic resonance imaging and tractography with R

Language: C++ - Size: 106 MB - Last synced at: 2 days ago - Pushed at: 4 days ago - Stars: 29 - Forks: 8

sampsapursiainen/zeffiro_interface

Interface for using finite elements in inverse problems with complex domains

Language: MATLAB - Size: 1.13 GB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 29 - Forks: 15

BrainDynamicsUSYD/nftsim

C++ library for simulation of multiscale neural field dynamics

Language: C++ - Size: 526 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 29 - Forks: 23

EIT-team/ScouseTom

Open Source EIT system using Keithley 6221 current source and EEG systems

Language: C++ - Size: 166 MB - Last synced at: 6 months ago - Pushed at: over 4 years ago - Stars: 28 - Forks: 7

jcreinhold/synthtorch 📦

deep neural network-based image translation/synthesis

Language: Python - Size: 1.17 MB - Last synced at: over 2 years ago - Pushed at: almost 4 years ago - Stars: 27 - Forks: 7

sarslancs/graph_saliency_maps

Graph saliency maps through spectral convolutional networks for brain mapping

Language: Python - Size: 58.6 MB - Last synced at: over 2 years ago - Pushed at: almost 7 years ago - Stars: 27 - Forks: 10

Jfortin1/RAVEL

Intensity normalization of structural MRIs using RAVEL

Language: HTML - Size: 1.12 MB - Last synced at: 12 months ago - Pushed at: almost 2 years ago - Stars: 26 - Forks: 12

EIT-team/Stroke_EIT_Dataset

Processing and directory structure for Stroke EIT Dataset

Language: MATLAB - Size: 94.4 MB - Last synced at: 6 months ago - Pushed at: almost 4 years ago - Stars: 24 - Forks: 3

Parietal-INRIA/DiFuMo

Dictionary of Functional Modes for brain imaging

Language: HTML - Size: 1.99 GB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 22 - Forks: 5

Dhanya-Abhirami/Brain-Tumour-Segmentation

Use of Image Processing to detect brain tumour in MRI Scan

Language: Jupyter Notebook - Size: 806 KB - Last synced at: 5 months ago - Pushed at: about 5 years ago - Stars: 21 - Forks: 7

BUNPC/pysnirf2

Python package for reading, writing and validating Shared Near Infrared Spectroscopy Format (SNIRF) files

Language: Python - Size: 32 MB - Last synced at: 2 days ago - Pushed at: about 1 month ago - Stars: 19 - Forks: 15

salmansust/AI-For-Medicine-Specialization

I have completed this specialization from Coursera by deeplearning.ai. I have uploaded the solutions of the assignments in this repo.

Language: Jupyter Notebook - Size: 2.68 MB - Last synced at: over 2 years ago - Pushed at: about 5 years ago - Stars: 18 - Forks: 9

IBT-FMI/mouse-brain-templates

Generate a package-manager-friendly mouse brain atlases collection.

Language: Shell - Size: 188 KB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 17 - Forks: 7

neuroscout/neuroscout

NeuroScout web app and API

Language: TypeScript - Size: 15.2 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 15 - Forks: 12

sergivalverde/sub-cortical_segmentation

Sub-cortical brain tissue segmentation using CNN

Language: Python - Size: 42.7 MB - Last synced at: over 2 years ago - Pushed at: almost 8 years ago - Stars: 14 - Forks: 8

favour-nerrise/xGW-GAT

An Explainable Geometric-Weighted Graph Attention Network (xGW-GAT) for Identifying Functional Networks Associated with Gait Impairment

Language: Python - Size: 70.3 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 13 - Forks: 2

elliohow/fMRI_ROI_Analysis_Tool

An analysis tool that uses per-voxel statistical maps in conjunction with FSL atlases to create per-region statistical maps. Current usage includes the creation of regional maps of temporal signal to noise ratio.

Language: Python - Size: 327 MB - Last synced at: 3 days ago - Pushed at: over 1 year ago - Stars: 13 - Forks: 4

alexandershaw4/SourceMesh

A multipurpose matlab-based MEG/EEG overlay & network plotter

Language: MATLAB - Size: 217 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 13 - Forks: 7

atdemarco/svrlsmgui

A graphical multivariate lesion-symptom mapping toolbox

Language: MATLAB - Size: 37.1 MB - Last synced at: 17 days ago - Pushed at: 17 days ago - Stars: 11 - Forks: 3

tsbinns/mni_to_atlas

A simple Python-based tool for finding brain atlas regions based on MNI coordinates.

Language: Python - Size: 715 KB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 11 - Forks: 0

tanyelai/neuroscience

Naive journal of computer engineering student who is trying to know more about brain science.

Language: MATLAB - Size: 18.1 MB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 11 - Forks: 1

laowangbobo/Residual_MLP_CNN_Mixer

(MICCAI 2022) PyTorch implementation of Denoising of 3D MR images using a voxel-wise hybrid residual MLP-CNN model to improve small lesion diagnostic confidence.

Language: Python - Size: 6.7 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 11 - Forks: 1

nipreps/nireports

The NiPreps' Reporting and Visualization system - report templates and "reportlets"

Language: Python - Size: 93.7 MB - Last synced at: 2 days ago - Pushed at: 20 days ago - Stars: 10 - Forks: 20

freesurfer/AutomatedFreeSurfer

Language: Shell - Size: 162 KB - Last synced at: 2 days ago - Pushed at: about 2 months ago - Stars: 10 - Forks: 2

emergelab/hierarchical-brain-networks

Determining the Hierarchical Architecture of the Human Brain Using Subject-Level Clustering of Functional Networks

Language: MATLAB - Size: 195 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 9 - Forks: 3

weikanggong/BWAS

A Python software package for BWAS

Language: Python - Size: 3.09 MB - Last synced at: almost 2 years ago - Pushed at: over 5 years ago - Stars: 9 - Forks: 5

BMHLab/BrainEigenmodes_legacy

Code supporting 'Geometric constraints on human brain function'

Language: MATLAB - Size: 172 MB - Last synced at: 4 months ago - Pushed at: about 2 years ago - Stars: 8 - Forks: 2

SABS-R3-projects/Paint4Brains

A brain MRI segmentation tool that provides accurate robust segmentation of problematic brain regions across the neurodegenerative spectrum. The methodology is generalisable to perform well with the typical variance in MRI acquisition parameters and other factors that influence image contrast.

Language: Python - Size: 230 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 8 - Forks: 0

alexandershaw4/PyBP-Py-BrainPlotter-for-AAL90

Visualisation & processing of MEG data and networks on meshes. A bunch of functions, examples and a gui.

Language: Python - Size: 27.4 MB - Last synced at: almost 2 years ago - Pushed at: almost 6 years ago - Stars: 8 - Forks: 1

hypercoil/hypercoil

A differentiable program for mapping brain function

Language: Python - Size: 17 MB - Last synced at: about 2 months ago - Pushed at: 11 months ago - Stars: 7 - Forks: 0

aluo-x/BrainDiVE

Brain Diffusion for Visual Exploration: Cortical Discovery using Large Scale Generative Models

Language: Python - Size: 47.9 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 7 - Forks: 0

TRIImaging/BIDSTools.jl

Tools for working with Brain Imaging Data Structure from Julia

Language: Julia - Size: 458 KB - Last synced at: 10 days ago - Pushed at: almost 5 years ago - Stars: 7 - Forks: 7

CarloNicolini/algonet

Collection of algorithms and functions in Matlab for graph theory. WARNING. This package is unmaintained and full of bugs.

Language: MATLAB - Size: 10.9 MB - Last synced at: 4 months ago - Pushed at: over 6 years ago - Stars: 7 - Forks: 1

dicemt/DTI-NODDI

:brain: DTI-NODDI: Create NODDI maps from DTI (either "FA and MD" or "L1, L2, and L3")

Language: Python - Size: 23.4 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 6 - Forks: 6

aiporre/gcn_segmentation

Stroke-GFCN: segmentation of Ischemic brain lesions

Language: Jupyter Notebook - Size: 104 MB - Last synced at: 5 months ago - Pushed at: about 2 years ago - Stars: 6 - Forks: 2

dfsp-spirit/abide_preproc_smri_freesurfer6

Data from our own pre-processing of the ABIDE I sMRI dataset (1035 subjects) in FreeSurfer v6.

Size: 1.7 MB - Last synced at: 5 months ago - Pushed at: about 2 years ago - Stars: 6 - Forks: 0

volBrain/DeeplesionBrain

Size: 1.95 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 6 - Forks: 0

razvanmarinescu/brain-coloring-website

BrainPainter Website code

Language: JavaScript - Size: 59 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 6 - Forks: 2

ML-D00M/ISC-Inter-Subject-Correlations

Inter-Subject Correlations (ISC) technique for analyzing neural data (EEG and MEG)

Language: MATLAB - Size: 74.2 KB - Last synced at: almost 2 years ago - Pushed at: about 4 years ago - Stars: 6 - Forks: 3

vgees/AI-in-3D-Medial-Imaging-Data

Application of AI in 3D Medical Imaging in quantifying Alzheimer's disease progression through automated measurement of hippocampal volume

Language: Jupyter Notebook - Size: 2.96 MB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 6 - Forks: 1

IBT-FMI/StereotaXYZ

Toolkit for the Empirical Design of Stereotactic Brain Implants

Language: Python - Size: 104 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 6 - Forks: 0

nipreps/nifreeze

A flexible framework for volume-wise artifact estimation and correction across multiple 4D neuroimaging modalities (diffusion MRI, functional MRI, and PET)

Language: Python - Size: 120 MB - Last synced at: 2 days ago - Pushed at: 7 days ago - Stars: 5 - Forks: 5

SoftcodingForYou/NeuriGUI

NeuriGUI is a modular, cross-platform and FOSS app for exploring electrophysiological signals in real-time - print("Hello, Volt!")

Language: Python - Size: 18.5 MB - Last synced at: 2 months ago - Pushed at: 4 months ago - Stars: 5 - Forks: 0

smlacava/Athena

ATHENA (Automatic Toolbox for Handling Experimental Neural Analysis)

Language: MATLAB - Size: 51.5 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 5 - Forks: 3

Raj-Lab-UCSF/Aggregation-Network-Diffusion

Code for implementing the Aggregation-Network diffusion model (AND), as described in the paper: "Combined Model of Aggregation And Network Diffusion Recapitulates Alzheimer’s Regional Tau-PET " by Ashish Raj*, Veronica Tora, Xiao Gao, Hanna Cho, Jae Yong Choi, Young Hoon Ryu, Chul Hyoung Lyoo, Bruno Franchi. *Department of Radiology and Biomedical Imaging, University of California at San Francisco

Language: MATLAB - Size: 5.52 MB - Last synced at: about 2 years ago - Pushed at: almost 5 years ago - Stars: 5 - Forks: 2

alexlaurence/CLARA

🐀🧠Using Convolutional Neural Networks to Predict fMRI Noise in Rats

Language: Jupyter Notebook - Size: 16.4 MB - Last synced at: 5 months ago - Pushed at: over 6 years ago - Stars: 5 - Forks: 1

ME-ICA/multi-echo-data-analysis

Still a work in progress.

Language: TeX - Size: 1.22 GB - Last synced at: 9 days ago - Pushed at: 17 days ago - Stars: 4 - Forks: 3

codingfisch/niftiview-app

Standalone app for viewing volumetric images 🧠 based on Python

Language: Python - Size: 1.61 MB - Last synced at: 11 days ago - Pushed at: 8 months ago - Stars: 4 - Forks: 0

kaledhoshme123/Convolutional-eXtreme-Gradient-Boosting-Brain-Tumor

Convolutional eXtreme Gradient Boosting for classification of brain tumors based on convolutional neural networks and XGBoost.

Language: Jupyter Notebook - Size: 1.16 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 4 - Forks: 2

PavanChaggar/ConnectomesOld.jl

A package for handling and plotting brain connectomes obtained thorugh tractography.

Language: Julia - Size: 518 MB - Last synced at: 6 months ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 1

NOEL-MNI/noelTexturesPy

Dash app to generate textures maps from T1-weighted MRI

Language: CSS - Size: 178 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 3 - Forks: 4

thuy-n/bst-neuromaps

neuromaps as a Brainstorm plugin!

Language: MATLAB - Size: 263 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 3 - Forks: 0

brainlife/brainlife.github.io

brainlife.io home page

Language: HTML - Size: 72.9 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 3 - Forks: 6

SAIL-GuoLab/DeepContrast_Demo

This is the repository that accompanies the manuscript "Deep Learning of MRI Contrast Enhancement for Mapping Cerebral Blood Volume from Single-Modal Non-Contrast Scans of Aging and Alzheimer's Disease Brains" accepted for publication in Frontiers in Aging Neuroscience, section Neurocognitive Aging and Behavior (July-18-2022).

Language: Python - Size: 1.42 MB - Last synced at: 7 days ago - Pushed at: about 3 years ago - Stars: 3 - Forks: 2

Pegah-Ardehkhani/Brain-MRI-Segmentation

U-Net from Scratch for Brain Tumor Segmentation

Language: Jupyter Notebook - Size: 8 MB - Last synced at: 6 months ago - Pushed at: about 3 years ago - Stars: 3 - Forks: 0

JohannesWiesner/pycat

A python package that imitates functions from the Computational Anatomy Toolbox - CAT12.

Language: Python - Size: 24.4 KB - Last synced at: 8 days ago - Pushed at: about 4 years ago - Stars: 3 - Forks: 0

petteriTeikari/voxelmorph_CT 📦

Language: Python - Size: 17 MB - Last synced at: 9 months ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 0

EIT-team/Tanks

Tanks used in EIT experiments. Adult and Neonate Head Tanks

Language: MATLAB - Size: 357 MB - Last synced at: over 2 years ago - Pushed at: over 6 years ago - Stars: 3 - Forks: 4

illidanlab/discriminative-fusion

Discriminative fusion of multiple brain networks

Language: Matlab - Size: 36.1 KB - Last synced at: 2 months ago - Pushed at: over 7 years ago - Stars: 3 - Forks: 1

myztery-neuroimg/brainstemx-full

Why should radiologists rely on eyesight alone, when computer vision and amazing open-source processing frameworks are already available. This respository hosts the full bash-based pipeline, whilst there is a minimal python+webui implementation also available open-source

Language: Shell - Size: 1.26 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 2 - Forks: 0

IParraMartin/CNN4Alzheimer

A tutorial to implement a CNN for dementia brain imaging classification

Language: Python - Size: 253 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 2 - Forks: 1

vsingh-group/oinr

Code for ICML 24 paper "Implicit Representations via Operator Learning"

Language: Python - Size: 5.88 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 0

pegasus-isi/freesurfer-osg-workflow

A Pegasus workflow for running FreeSurfer on the Open Science Grid

Language: Python - Size: 13 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 2 - Forks: 3

HarryZhangHH/Brain-Imaging

pRF mapping of fMRI

Language: Jupyter Notebook - Size: 12.9 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0

ME-ICA/godec

Go Decomposition for fMRI data, in Python. A work in progress.

Language: Python - Size: 16.5 MB - Last synced at: 2 days ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 0

ML-D00M/Analyzing-Neural-Data

Analysis of brain data, primarily EEG (electroencephalography) and MEG (magnetoencephalography)

Language: Jupyter Notebook - Size: 18.8 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0

BBELAOUCHA/iSDR_p

A solver of EEG/MEG inverse problem using a multivariate auto-regressive model on the source space

Language: Jupyter Notebook - Size: 18 MB - Last synced at: over 1 year ago - Pushed at: almost 6 years ago - Stars: 2 - Forks: 2

wmotte/ocd

Scripts to process preclinical obsessive compulsive disorder data

Language: R - Size: 7.27 MB - Last synced at: over 1 year ago - Pushed at: about 6 years ago - Stars: 2 - Forks: 2

NIDCD/lsnm_in_python 📦

Large Scale Neural Modeling (LSNM) simulator in Python

Language: CWeb - Size: 196 MB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 2 - Forks: 5

dherath/Watershed_Segmentation

Matlab files for application of watershed segmentation on Brain MRI Images

Language: Matlab - Size: 6.88 MB - Last synced at: over 2 years ago - Pushed at: over 8 years ago - Stars: 2 - Forks: 3

Related Topics
neuroimaging 43 python 32 neuroscience 29 deep-learning 26 mri 25 fmri 18 brain 14 brain-mri 13 machine-learning 13 segmentation 13 medical-imaging 13 eeg 10 pytorch 9 visualization 9 image-processing 9 brain-tumor-segmentation 7 brain-connectivity 7 mri-brain 7 computational-neuroscience 6 bids 6 convolutional-neural-networks 6 mri-images 6 nifti 6 ai 5 connectome 5 dicom 5 brain-networks 5 tensorflow 5 fmri-data-analysis 5 mri-segmentation 5 meg 5 big-data 5 cnn 5 computer-vision 5 deep-neural-networks 4 neural-network 4 magnetic-resonance-imaging 4 data-science 4 freesurfer 4 image-analysis 4 neuroanatomy 4 medical-image-processing 4 network-neuroscience 3 functional-connectivity 3 eit 3 electrical-impedance-tomography 3 unet 3 tractography 3 fmri-preprocessing 3 deeplearning 3 neural-networks 3 brain-computer-interface 3 eeg-analysis 3 brain-atlas 3 keras-tensorflow 3 resting-state-fmri 3 biomedical-image-processing 3 eeg-signals 3 imaging 3 nifti-format 3 statistics 3 workflow-engine 3 alzheimer 3 dataflow-programming 3 brain-modeling 3 cnn-keras 3 open-source 3 dataflow 2 tomography 2 research 2 high-performance-computing 2 brain-segmentation 2 pipeline 2 3d-printing 2 automation 2 dementia 2 nirs 2 fnirs 2 eeg-signals-processing 2 docker 2 pet 2 biomedical 2 mri-applications 2 mri-brain-segmentation 2 ants 2 u-net 2 brainweb 2 eeg-headset 2 decoding 2 dataset 2 predictive-modeling 2 brain-tumor-classification 2 distributed-brain-procesess 2 community-detection 2 healthcare-imaging 2 brain-visualization 2 connectivity 2 structural-mri 2 graph-theory 2 network-analysis 2