Topic: "biomedical-image-processing"
Dana-Farber-AIOS/pathml
Tools for computational pathology
Language: Python - Size: 218 MB - Last synced at: 17 days ago - Pushed at: about 1 month ago - Stars: 425 - Forks: 87

seung-lab/connected-components-3d
Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)
Language: C++ - Size: 21 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 417 - Forks: 47

cambridgeltl/visual-med-alpaca
Visual Med-Alpaca is an open-source, multi-modal foundation model designed specifically for the biomedical domain, built on the LLaMa-7B.
Language: Python - Size: 32.9 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 385 - Forks: 42

jvanvugt/pytorch-unet
Tunable U-Net implementation in PyTorch
Language: Python - Size: 16.6 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 294 - Forks: 92

seung-lab/euclidean-distance-transform-3d
Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.
Language: C++ - Size: 6.54 MB - Last synced at: 12 days ago - Pushed at: 4 months ago - Stars: 249 - Forks: 36

OpenEIT/OpenEIT
Python based dashboard for real-time Electrical Impedance Tomography including image reconstruction using Back Projection, Graz Consensus and Gauss Newton methods
Language: Python - Size: 188 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 230 - Forks: 72

tkuanlun350/3DUnet-Tensorflow-Brats18
3D Unet biomedical segmentation model powered by tensorpack with fast io speed
Language: Python - Size: 7.65 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 197 - Forks: 69

zudi-lin/pytorch_connectomics
PyTorch Connectomics: segmentation toolbox for EM connectomics
Language: Python - Size: 91.1 MB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 182 - Forks: 78

mlcommons/GaNDLF
A generalizable application framework for segmentation, regression, and classification using PyTorch
Language: Python - Size: 69.9 MB - Last synced at: 15 days ago - Pushed at: 16 days ago - Stars: 177 - Forks: 86

BiaPyX/BiaPy
Open source Python library for building bioimage analysis pipelines
Language: Jupyter Notebook - Size: 1.1 GB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 171 - Forks: 35

anjanatiha/Pneumonia-Detection-from-Chest-X-Ray-Images-with-Deep-Learning
Detecting Pneumonia in Chest X-ray Images using Convolutional Neural Network and Pretrained Models
Language: Jupyter Notebook - Size: 28 MB - Last synced at: 8 days ago - Pushed at: over 6 years ago - Stars: 166 - Forks: 79

ELEKTRONN/elektronn3
A PyTorch-based library for working with 3D and 2D convolutional neural networks, with focus on semantic segmentation of volumetric biomedical image data
Language: Python - Size: 3.1 MB - Last synced at: 27 days ago - Pushed at: over 1 year ago - Stars: 164 - Forks: 29

seung-lab/cloud-volume
Read and write Neuroglancer datasets programmatically.
Language: Python - Size: 65.8 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 153 - Forks: 52

seung-lab/kimimaro
Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)
Language: C++ - Size: 13.1 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 152 - Forks: 27

sacmehta/YNet
Y-Net: Joint Segmentation and Classification for Diagnosis of Breast Biopsy Images
Language: Python - Size: 33.2 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 132 - Forks: 34

yuanqing811/ISIC2018
ISIC 2018: Skin Lesion Analysis Towards Melanoma Detection
Language: Python - Size: 1.22 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 119 - Forks: 49

mattmacy/torchbiomed
Datasets, Transforms and Utilities specific to Biomedical Imaging
Language: Python - Size: 52.7 KB - Last synced at: over 1 year ago - Pushed at: almost 7 years ago - Stars: 107 - Forks: 32

amrzhd/MRISkullStripping
Developing a UNet3D model for accurate MRI skull stripping using the Calgary Campinas 359 dataset, enhancing neuroimaging preprocessing workflows.
Language: Jupyter Notebook - Size: 60.5 KB - Last synced at: about 1 month ago - Pushed at: 7 months ago - Stars: 94 - Forks: 2

mirzaevinom/promise12_segmentation
Codes that I have written to complete promise12 prostate segmentation competition.
Language: Python - Size: 452 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 94 - Forks: 44

seung-lab/dijkstra3d
Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes
Language: C++ - Size: 2.53 MB - Last synced at: about 1 month ago - Pushed at: 5 months ago - Stars: 80 - Forks: 14

google-research/sofima
Scalable Optical Flow-based Image Montaging and Alignment
Language: Jupyter Notebook - Size: 4.73 MB - Last synced at: 25 days ago - Pushed at: 4 months ago - Stars: 73 - Forks: 16

seung-lab/zmesh
Marching Cubes & Mesh Simplification on multi-label 3D images.
Language: C++ - Size: 621 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 62 - Forks: 8

seung-lab/fastremap
Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
Language: C++ - Size: 5.95 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 56 - Forks: 7

aangelopoulos/im2im-uq
Image-to-image regression with uncertainty quantification in PyTorch. Take any dataset and train a model to regress images to images with rigorous, distribution-free uncertainty quantification.
Language: Python - Size: 5.24 MB - Last synced at: 4 days ago - Pushed at: over 2 years ago - Stars: 56 - Forks: 10

hoang-ho/Skin_Lesions_Classification_DCNNs
Transfer Learning with DCNNs (DenseNet, Inception V3, Inception-ResNet V2, VGG16) for skin lesions classification
Language: Jupyter Notebook - Size: 11.2 MB - Last synced at: over 2 years ago - Pushed at: over 5 years ago - Stars: 47 - Forks: 29

JiaxinZhuang/Skin-Lesion-Recognition.Pytorch
Rank3 Code for ISIC 2018: Skin Lesion Analysis Towards Melanoma Detection, Task 3
Language: Python - Size: 809 KB - Last synced at: 7 months ago - Pushed at: almost 5 years ago - Stars: 46 - Forks: 9

RuiyangJu/Bone_Fracture_Detection_YOLOv8
Scientific Reports 2023
Language: Python - Size: 7.07 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 43 - Forks: 8

fangq/mmc
Mesh-based Monte Carlo (MMC)
Language: C - Size: 19.9 MB - Last synced at: 8 days ago - Pushed at: 12 days ago - Stars: 41 - Forks: 33

jvwilliams23/pyssam
A Python library for biomedical statistical shape and appearance modelling.
Language: Python - Size: 28.4 MB - Last synced at: 24 days ago - Pushed at: about 1 year ago - Stars: 34 - Forks: 3

vaibhavshukla182/Brain-MRI-Segmentation
Smart India Hackathon 2019 project given by the Department of Atomic Energy
Language: Python - Size: 6.76 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 33 - Forks: 13

anjanatiha/Cancer-Detection-from-Microscopic-Tissue-Images-with-Deep-Learning
Cancer Detection from Microscopic Images by Fine-tuning Pre-trained Models ("Inception") for new class labels
Language: Jupyter Notebook - Size: 27 MB - Last synced at: 8 days ago - Pushed at: about 5 years ago - Stars: 30 - Forks: 10

cviaai/BIA-course
A course in biomedical image analytics by Prof. Dmitry V. Dylov
Language: Jupyter Notebook - Size: 29.7 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 19 - Forks: 2

sacmehta/WSISegmentation
Segmenting WSIs using Deep Convolutional Neural Networks
Language: Lua - Size: 3.06 MB - Last synced at: over 2 years ago - Pushed at: almost 7 years ago - Stars: 16 - Forks: 3

seung-lab/microviewer
Multiplatform 3D numpy image browser based viewer with voxel painting.
Language: JavaScript - Size: 2.06 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 15 - Forks: 2

sauravmishra1710/UNet-Plus-Plus---Brain-Tumor-Segmentation
Brain tumor segmentation using UNet++ Architecture . Implementation of the paper titled - UNet++: A Nested U-Net Architecture for Medical Image Segmentation @ https://arxiv.org/abs/1807.10165
Language: Jupyter Notebook - Size: 36.6 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 15 - Forks: 1

Beknaizer/OCT-Retinal-Layer-Segmenter
Language: Jupyter Notebook - Size: 5.1 MB - Last synced at: over 2 years ago - Pushed at: almost 3 years ago - Stars: 15 - Forks: 1

sondosaabed/Biomedical-Image-Analysis-in-Python
gaining essential skills for tasks like cardiac MRI segmentation and detecting Alzheimer's-related brain structure changes.
Language: Jupyter Notebook - Size: 10.2 MB - Last synced at: 2 days ago - Pushed at: over 1 year ago - Stars: 14 - Forks: 0

sagnik1511/U-Net-Reduced-with-TF-keras
Complete U-net Implementation with keras
Language: Python - Size: 7.9 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 14 - Forks: 2

halleewong/MultiverSeg
MultiverSeg: Scalable Interactive Segmentation of Biomedical Imaging Datasets with In-Context Guidance
Language: Jupyter Notebook - Size: 1.8 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 12 - Forks: 2

mida-project/meta Fork of MIMBCD-UI/meta
:paperclip: About MIDA Project
Size: 143 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 12 - Forks: 1

junlabucsd/napari-mm3
Mother machine image analysis through napari
Language: Jupyter Notebook - Size: 20.1 MB - Last synced at: 11 days ago - Pushed at: 5 months ago - Stars: 10 - Forks: 4

luisvalesilva/wsipre
Handling whole-slide images with region-level annotations.
Language: Jupyter Notebook - Size: 7.55 MB - Last synced at: 2 months ago - Pushed at: over 6 years ago - Stars: 10 - Forks: 5

Kiemen-Lab/CODAvision
CODAvision - open source medical image labeling tool
Language: Python - Size: 39.1 MB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 9 - Forks: 1

seung-lab/tinybrain
Image pyramid generation for grayscale and segmentation image resize.
Language: Python - Size: 1.11 MB - Last synced at: 12 days ago - Pushed at: 2 months ago - Stars: 9 - Forks: 0

kyegomez/SimpleUnet
An simple implementation of Unet because all the implementations i've seen are wayy tooo complicated.
Language: Python - Size: 205 KB - Last synced at: 11 days ago - Pushed at: 7 months ago - Stars: 9 - Forks: 1

sauravmishra1710/Malaria-Detection-Using-Deep-Learning-Techniques
Malaria Parasite Detection using Efficient Neural Ensembles. Malaria, a life threatening disease caused by the bite of the Anopheles mosquito infected with the parasite, has been a major burden towards healthcare for years leading to approximately 400,000 deaths globally every year. This study aims to build an efficient system by applying ensemble techniques based on deep learning to automate the detection of the parasite using whole slide images of thin blood smears.
Language: Jupyter Notebook - Size: 295 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 9 - Forks: 5

seung-lab/data-cube-x Fork of william-silversmith/data-cube-x
JS biomedical 3D image stack. Fast CPU rendering. Easy web app integration.
Language: JavaScript - Size: 16.1 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 9 - Forks: 1

sondosaabed/DataCamp-Image-Processing-Track
This track covers the fundamentals, from image pre-processing to deep learning. Began with image enhancement, restoration, biomedical images to convolutional neural nets, build powerful deep learning image classifiers.
Size: 2.93 KB - Last synced at: 2 months ago - Pushed at: over 1 year ago - Stars: 8 - Forks: 0

eliashossain001/Bone-Fracture-Detection
Detecting fractures on top of X-ray imaging modalities using various state-of-the-art techniques of deep learning
Language: Jupyter Notebook - Size: 63.1 MB - Last synced at: over 2 years ago - Pushed at: about 3 years ago - Stars: 8 - Forks: 5

Borda/pyBPDL
Binary Pattern Dictionary Learning for gene activation in microscopy images
Language: Python - Size: 9.97 MB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 8 - Forks: 1

sauravmishra1710/U-Net---Biomedical-Image-Segmentation
Implementation of the paper titled - U-Net: Convolutional Networks for Biomedical Image Segmentation @ https://arxiv.org/abs/1505.04597
Language: Jupyter Notebook - Size: 11.1 MB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 8 - Forks: 5

SABS-R3-projects/Paint4Brains
A brain MRI segmentation tool that provides accurate robust segmentation of problematic brain regions across the neurodegenerative spectrum. The methodology is generalisable to perform well with the typical variance in MRI acquisition parameters and other factors that influence image contrast.
Language: Python - Size: 230 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 8 - Forks: 0

TylerAdamMartinez/Body-Signals-Filtering
BMEN 3311 (Biomedical Signal Analysis): Reads in biomedical data from a patient’s files into a script and plots the data. Then take the discrete Fourier transforms of each signal then plot the frequency Spectrums. In addition, create a digital notch filter to remove the noise coming from mains power in the ECG signal without creating a phase shift due to filtering (zero-phase filtering), determine if the patient was tired during the recording of the EMG signal based on the frequency spectrum of the EMG signal, and determine the mental state of the patient during the recording of the EEG signal based on the frequency spectrum of the EEG signal. Finally, break down how much of the EEG signal is comprised of the four EEG wave components (Delta, Theta, Alpha and Beta), and display it in a bar graph.
Language: MATLAB - Size: 1.15 MB - Last synced at: 3 months ago - Pushed at: over 3 years ago - Stars: 7 - Forks: 2

ELEKTRONN/ELEKTRONN2
A highly configurable toolkit for training 3D/2D CNNs and general Neural Networks, based on Theano
Language: Python - Size: 1.32 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 7 - Forks: 8

souheib1/Refinement-of-DL-approaches-for-unsupervised-cell-segmentation-classification-on-microfluidic-images
Research internship 2023 at Telecom Paris
Language: Jupyter Notebook - Size: 915 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 0

brainlife/abcd-spec
Application for Big Computational Data Specification (v1.1). This specification provide information on how to write an Application that can run on the open platform
Language: Python - Size: 8.3 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 6 - Forks: 5

alksarioglou/biomed_imaging
Simulating biomedical imaging modalities (X-Ray, Positron Emission Tomography, Magnetic Resonance Imaging, Ultrasound Imaging) using MATLAB
Language: MATLAB - Size: 4.46 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 6 - Forks: 1

gabrielziegler3/CoDePPI
Context-dependent Probabilistic Prior Information for Improved Compressed Sensing MRI Reconstruction
Language: Python - Size: 127 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 6 - Forks: 1

drcerenkaya/COVID-19-DetectionV2
COVID-19 Detection Using Chest X-Ray Images and Deep Convolutional Neural Networks
Language: Jupyter Notebook - Size: 57.6 KB - Last synced at: 9 days ago - Pushed at: almost 4 years ago - Stars: 6 - Forks: 6

drcerenkaya/COVID-19-Detection
COVID-19 Detection Using Chest X-Ray Images and Deep Convolutional Neural Networks
Language: Jupyter Notebook - Size: 2.64 MB - Last synced at: 9 days ago - Pushed at: over 4 years ago - Stars: 6 - Forks: 4

IQTLabs/BioNIC 📦
optimizing deep learning for ultra-small biomedical datasets
Language: Jupyter Notebook - Size: 3.83 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 5 - Forks: 1

AdrianBZG/Muscular-Dystrophy-Diagnosis
Code for "A Convolutional Neural Network for the automatic diagnosis of collagen VI-related muscular dystrophies" (Applied Soft Computing, 2019)
Language: Python - Size: 35.6 MB - Last synced at: 2 months ago - Pushed at: over 5 years ago - Stars: 5 - Forks: 1

shubhamkriitr/INFINET-ISEG-2017
Language: Python - Size: 84 KB - Last synced at: about 2 years ago - Pushed at: about 7 years ago - Stars: 5 - Forks: 3

RuiyangJu/YOLOv8_Global_Context_Fracture_Detection
ISPACS 2024
Language: Python - Size: 4.76 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 4 - Forks: 1

GiannisPikoulis/CheXpert
Codebase for automated CXR diagnosis on CheXpert dataset and competition.
Language: Python - Size: 46.9 KB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 0

sweetpand/Tensorflow_Best_practices
Biomedical Image Analysis with TensorFlow and DLTK
Language: Python - Size: 868 KB - Last synced at: 3 months ago - Pushed at: about 5 years ago - Stars: 4 - Forks: 2

fitushar/Quantification-of-Trabeculae-Inside-the-Heart-from-MRI-Using-Fractal-Analysis
In this project, we demonstrate the fractal dimension (FD) and manual segmentation of the Magnetic Resonance Imaging (MRI) of the heart that quantify amount of trabeculae inside the heart.
Language: MATLAB - Size: 20.5 MB - Last synced at: 4 months ago - Pushed at: over 6 years ago - Stars: 4 - Forks: 0

zaaachos/Thesis-Diagnostic-Captioning
BSc Thesis research on Medical Image Captioning [ or Diagnostic Captioning (DC) ]
Language: Python - Size: 69.3 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

reshalfahsi/MSGNet
Modified MobileNet-ShuffleNet-GhostNet Network for Lightweight Retinal Vessel Segmentation
Language: Python - Size: 454 KB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

andandandand/evolution-rules-of-deterministic-ca-for-multichannel-brain
CUDA GPU programs and Matlab invocation scripts for variations on the GrowCut cellular automaton.
Language: MATLAB - Size: 855 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 2

pokarats/LAP-final-project
Multimodal Bi-Transformers (MMBT) in Biomedical Text/Image Classification
Language: Jupyter Notebook - Size: 156 MB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 3 - Forks: 0

ceidas/Medical-Imaging-Project
This project was completed in 2018 as a part of my postgraduate studies in Biomedical Engineering
Language: MATLAB - Size: 4.33 MB - Last synced at: about 2 months ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 1

anjanatiha/Malaria-Parasite-Detection-in-Thin-Blood-Smear-Images-with-Convolutional-Neural-Networks
Malaria Detection from Cell Images using Deep Learning - NasNetMobile Model
Language: Jupyter Notebook - Size: 365 KB - Last synced at: 8 days ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 3

awcasella/Calculo-Numerico-UNIFESP-SJC-EngBio
This repository contains all the algorithms studied in discipline "Calculo Numerico" of Biomedical Engineering course at UNIFESP in the second semester of 2018.
Language: MATLAB - Size: 22.5 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 3 - Forks: 1

awcasella/Imagens-Biomedicas-UNIFESP-SJC-EngBio
This repository contains all the image processing algorithms studied in discipline "Imagens Biomédicas" of Biomedical Engineering course at UNIFESP in the first semester of 2017. All the algorithms are written in both MatLab and Python Languages.
Language: MATLAB - Size: 1.68 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 3 - Forks: 1

andandandand/fractal-dimension-of-brain-tumors-w-box-counting-algo
Language: Mathematica - Size: 7.2 MB - Last synced at: about 2 years ago - Pushed at: about 9 years ago - Stars: 3 - Forks: 0

ciroraggio/AugmentedDataLoader
Medical image augmentation tool that can be integrated with Pytorch & MONAI.
Language: Python - Size: 4.23 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 2 - Forks: 0

Amirhosein2c/MIP-DDPM
How To Segment in 3D Using 2D Models: Automated 3D Segmentation of Prostate Cancer Metastatic Lesions on PET Volumes Using Multi-Angle Maximum Intensity Projections and Diffusion Models
Language: Jupyter Notebook - Size: 3.28 MB - Last synced at: 2 months ago - Pushed at: 7 months ago - Stars: 2 - Forks: 0

amarrammadhu/Biomedical-Engineering-
My assignments and projects concerned with Biomedical Engineering
Language: TeX - Size: 5.26 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 2 - Forks: 0

emogooo/Biomedical-Data-Processing-with-Image-Filters
Processing biomedical data using LBP, HOG, and Gabor filters for enhanced analysis and feature extraction.
Language: Python - Size: 17.9 MB - Last synced at: 3 months ago - Pushed at: 12 months ago - Stars: 2 - Forks: 0

FilippoCastellani/CaVe
Biomedical Signal Processing & Medical Images - projects realized by a team of students from Politecnico di Milano.
Language: MATLAB - Size: 256 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

MarioPasc/Biomedical_images_first_assignment
This repository contains all the code I've written for the first assignment of the course 'Biomedical Images'
Language: Jupyter Notebook - Size: 10.6 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

Gaurav0502/retina-multilabel-classification
Retina Disease Detection using Ensemble methods for Multilabel Classification
Language: Jupyter Notebook - Size: 10.7 MB - Last synced at: 2 months ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 0

mendes-davi/biomedical-signal-processing
A collection of mostly MATLAB scripts for Biomedical Signal Processing used and developed for the "Biological Signal Processing" lectures at UnB (Universidade de Brasília, Brazil)
Language: MATLAB - Size: 47.5 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0

awcasella/Engenharia-Medica-Aplicada-UNIFESP-SJC-EngBio
This repository contains all the machine learning algorithms studied in discipline "Engenharia Médica Aplicada" of Biomedical Engineering course at UNIFESP in the second semester of 2018. All the algorithms are written in both MatLab and Python Languages.
Language: MATLAB - Size: 102 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 2

mbalestrat/ECE-FYP-PneumoCheck
rPPG algorithm allowing for estimation of pulse and SpO2 from a video of a patient's face. ECE Final Year Project at Monash University.
Language: MATLAB - Size: 1.03 MB - Last synced at: over 2 years ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 1

ucalyptus/Kaggle-Histopathological-Cancer-Detection-Challenge
Private LB 169/1157
Language: Jupyter Notebook - Size: 1.5 MB - Last synced at: over 2 years ago - Pushed at: almost 6 years ago - Stars: 2 - Forks: 3

radim94/Diploma
Code for my Master's Diploma(June 2018)
Language: Matlab - Size: 1.64 MB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 2 - Forks: 1

rnpnr/ogl_beamforming
Language: C - Size: 920 KB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 1 - Forks: 4

premDelaprem/MRI-tumor-classification
Building CNN models to detect and classify brain tumors using images of MRI scans
Language: Jupyter Notebook - Size: 26.4 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 1 - Forks: 0

SohelRana-aiub-Pro/Biomedical-Engineering-Research-Projects
Artificial intelligence (AI) is gradually changing medical practice. With recent progress in digitized data acquisition, machine learning and computing infrastructure, AI applications are expanding into areas that were previously thought to be only the province of human experts.
Size: 24.4 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0

pathak-ashutosh/liver-segmentation
Segment liver using unet architecture. This was a project I did for a senior anonymously as his final year project during my undergrad.
Language: Jupyter Notebook - Size: 45.9 MB - Last synced at: 4 months ago - Pushed at: 12 months ago - Stars: 1 - Forks: 0

reshalfahsi/contrastive-ssl-pathology
Self-Supervised Contrastive Learning for Colon Pathology Classification
Language: Jupyter Notebook - Size: 1.07 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

jedrzej-put/biomedical_classification
Language: Jupyter Notebook - Size: 232 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

felipe-parodi/neogaze
Repository for "Zero-Shot Classifiers Are Optimal Gaze Estimators During Neonatal Resuscitation"
Language: Jupyter Notebook - Size: 4.9 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

yasin-peker/Medical-X-Ray-Imaging
In this project, medical X-Ray imaging methods using MATLAB tools are studied. In order to design the model of the X-Ray imaging as software, the X-Ray imaging project is divided into two parts, namely the forward problem and the inverse problem
Language: MATLAB - Size: 2.17 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0

salinaria/dip-course 📦
Digital Image processing course Fall 1401
Language: Jupyter Notebook - Size: 22.6 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

OmarAlkousa/DICOM-Using-Python
How to deal with DICOM files using Python packages, ImageIO and PyDicom
Language: Jupyter Notebook - Size: 14.4 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

nicholasbook/slicevis
A python package for interactive visualization of volumetric slices.
Language: Python - Size: 40.8 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

Thomas-JHR/Biomedical-Image-and-Signal-Processing
Introduction for biomedical image and signal processing
Language: MATLAB - Size: 2.87 MB - Last synced at: over 2 years ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 0
