An open API service providing repository metadata for many open source software ecosystems.

Topic: "biomedical-image-processing"

Dana-Farber-AIOS/pathml

Tools for computational pathology

Language: Python - Size: 218 MB - Last synced at: 17 days ago - Pushed at: about 1 month ago - Stars: 425 - Forks: 87

seung-lab/connected-components-3d

Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)

Language: C++ - Size: 21 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 417 - Forks: 47

cambridgeltl/visual-med-alpaca

Visual Med-Alpaca is an open-source, multi-modal foundation model designed specifically for the biomedical domain, built on the LLaMa-7B.

Language: Python - Size: 32.9 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 385 - Forks: 42

jvanvugt/pytorch-unet

Tunable U-Net implementation in PyTorch

Language: Python - Size: 16.6 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 294 - Forks: 92

seung-lab/euclidean-distance-transform-3d

Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.

Language: C++ - Size: 6.54 MB - Last synced at: 12 days ago - Pushed at: 4 months ago - Stars: 249 - Forks: 36

OpenEIT/OpenEIT

Python based dashboard for real-time Electrical Impedance Tomography including image reconstruction using Back Projection, Graz Consensus and Gauss Newton methods

Language: Python - Size: 188 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 230 - Forks: 72

tkuanlun350/3DUnet-Tensorflow-Brats18

3D Unet biomedical segmentation model powered by tensorpack with fast io speed

Language: Python - Size: 7.65 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 197 - Forks: 69

zudi-lin/pytorch_connectomics

PyTorch Connectomics: segmentation toolbox for EM connectomics

Language: Python - Size: 91.1 MB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 182 - Forks: 78

mlcommons/GaNDLF

A generalizable application framework for segmentation, regression, and classification using PyTorch

Language: Python - Size: 69.9 MB - Last synced at: 15 days ago - Pushed at: 16 days ago - Stars: 177 - Forks: 86

BiaPyX/BiaPy

Open source Python library for building bioimage analysis pipelines

Language: Jupyter Notebook - Size: 1.1 GB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 171 - Forks: 35

anjanatiha/Pneumonia-Detection-from-Chest-X-Ray-Images-with-Deep-Learning

Detecting Pneumonia in Chest X-ray Images using Convolutional Neural Network and Pretrained Models

Language: Jupyter Notebook - Size: 28 MB - Last synced at: 8 days ago - Pushed at: over 6 years ago - Stars: 166 - Forks: 79

ELEKTRONN/elektronn3

A PyTorch-based library for working with 3D and 2D convolutional neural networks, with focus on semantic segmentation of volumetric biomedical image data

Language: Python - Size: 3.1 MB - Last synced at: 27 days ago - Pushed at: over 1 year ago - Stars: 164 - Forks: 29

seung-lab/cloud-volume

Read and write Neuroglancer datasets programmatically.

Language: Python - Size: 65.8 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 153 - Forks: 52

seung-lab/kimimaro

Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

Language: C++ - Size: 13.1 MB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 152 - Forks: 27

sacmehta/YNet

Y-Net: Joint Segmentation and Classification for Diagnosis of Breast Biopsy Images

Language: Python - Size: 33.2 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 132 - Forks: 34

yuanqing811/ISIC2018

ISIC 2018: Skin Lesion Analysis Towards Melanoma Detection

Language: Python - Size: 1.22 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 119 - Forks: 49

mattmacy/torchbiomed

Datasets, Transforms and Utilities specific to Biomedical Imaging

Language: Python - Size: 52.7 KB - Last synced at: over 1 year ago - Pushed at: almost 7 years ago - Stars: 107 - Forks: 32

amrzhd/MRISkullStripping

Developing a UNet3D model for accurate MRI skull stripping using the Calgary Campinas 359 dataset, enhancing neuroimaging preprocessing workflows.

Language: Jupyter Notebook - Size: 60.5 KB - Last synced at: about 1 month ago - Pushed at: 7 months ago - Stars: 94 - Forks: 2

mirzaevinom/promise12_segmentation

Codes that I have written to complete promise12 prostate segmentation competition.

Language: Python - Size: 452 KB - Last synced at: over 1 year ago - Pushed at: over 7 years ago - Stars: 94 - Forks: 44

seung-lab/dijkstra3d

Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes

Language: C++ - Size: 2.53 MB - Last synced at: about 1 month ago - Pushed at: 5 months ago - Stars: 80 - Forks: 14

google-research/sofima

Scalable Optical Flow-based Image Montaging and Alignment

Language: Jupyter Notebook - Size: 4.73 MB - Last synced at: 25 days ago - Pushed at: 4 months ago - Stars: 73 - Forks: 16

seung-lab/zmesh

Marching Cubes & Mesh Simplification on multi-label 3D images.

Language: C++ - Size: 621 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 62 - Forks: 8

seung-lab/fastremap

Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.

Language: C++ - Size: 5.95 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 56 - Forks: 7

aangelopoulos/im2im-uq

Image-to-image regression with uncertainty quantification in PyTorch. Take any dataset and train a model to regress images to images with rigorous, distribution-free uncertainty quantification.

Language: Python - Size: 5.24 MB - Last synced at: 4 days ago - Pushed at: over 2 years ago - Stars: 56 - Forks: 10

hoang-ho/Skin_Lesions_Classification_DCNNs

Transfer Learning with DCNNs (DenseNet, Inception V3, Inception-ResNet V2, VGG16) for skin lesions classification

Language: Jupyter Notebook - Size: 11.2 MB - Last synced at: over 2 years ago - Pushed at: over 5 years ago - Stars: 47 - Forks: 29

JiaxinZhuang/Skin-Lesion-Recognition.Pytorch

Rank3 Code for ISIC 2018: Skin Lesion Analysis Towards Melanoma Detection, Task 3

Language: Python - Size: 809 KB - Last synced at: 7 months ago - Pushed at: almost 5 years ago - Stars: 46 - Forks: 9

RuiyangJu/Bone_Fracture_Detection_YOLOv8

Scientific Reports 2023

Language: Python - Size: 7.07 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 43 - Forks: 8

fangq/mmc

Mesh-based Monte Carlo (MMC)

Language: C - Size: 19.9 MB - Last synced at: 8 days ago - Pushed at: 12 days ago - Stars: 41 - Forks: 33

jvwilliams23/pyssam

A Python library for biomedical statistical shape and appearance modelling.

Language: Python - Size: 28.4 MB - Last synced at: 24 days ago - Pushed at: about 1 year ago - Stars: 34 - Forks: 3

vaibhavshukla182/Brain-MRI-Segmentation

Smart India Hackathon 2019 project given by the Department of Atomic Energy

Language: Python - Size: 6.76 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 33 - Forks: 13

anjanatiha/Cancer-Detection-from-Microscopic-Tissue-Images-with-Deep-Learning

Cancer Detection from Microscopic Images by Fine-tuning Pre-trained Models ("Inception") for new class labels

Language: Jupyter Notebook - Size: 27 MB - Last synced at: 8 days ago - Pushed at: about 5 years ago - Stars: 30 - Forks: 10

cviaai/BIA-course

A course in biomedical image analytics by Prof. Dmitry V. Dylov

Language: Jupyter Notebook - Size: 29.7 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 19 - Forks: 2

sacmehta/WSISegmentation

Segmenting WSIs using Deep Convolutional Neural Networks

Language: Lua - Size: 3.06 MB - Last synced at: over 2 years ago - Pushed at: almost 7 years ago - Stars: 16 - Forks: 3

seung-lab/microviewer

Multiplatform 3D numpy image browser based viewer with voxel painting.

Language: JavaScript - Size: 2.06 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 15 - Forks: 2

sauravmishra1710/UNet-Plus-Plus---Brain-Tumor-Segmentation

Brain tumor segmentation using UNet++ Architecture . Implementation of the paper titled - UNet++: A Nested U-Net Architecture for Medical Image Segmentation @ https://arxiv.org/abs/1807.10165

Language: Jupyter Notebook - Size: 36.6 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 15 - Forks: 1

Beknaizer/OCT-Retinal-Layer-Segmenter

Language: Jupyter Notebook - Size: 5.1 MB - Last synced at: over 2 years ago - Pushed at: almost 3 years ago - Stars: 15 - Forks: 1

sondosaabed/Biomedical-Image-Analysis-in-Python

gaining essential skills for tasks like cardiac MRI segmentation and detecting Alzheimer's-related brain structure changes.

Language: Jupyter Notebook - Size: 10.2 MB - Last synced at: 2 days ago - Pushed at: over 1 year ago - Stars: 14 - Forks: 0

sagnik1511/U-Net-Reduced-with-TF-keras

Complete U-net Implementation with keras

Language: Python - Size: 7.9 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 14 - Forks: 2

halleewong/MultiverSeg

MultiverSeg: Scalable Interactive Segmentation of Biomedical Imaging Datasets with In-Context Guidance

Language: Jupyter Notebook - Size: 1.8 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 12 - Forks: 2

mida-project/meta Fork of MIMBCD-UI/meta

:paperclip: About MIDA Project

Size: 143 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 12 - Forks: 1

junlabucsd/napari-mm3

Mother machine image analysis through napari

Language: Jupyter Notebook - Size: 20.1 MB - Last synced at: 11 days ago - Pushed at: 5 months ago - Stars: 10 - Forks: 4

luisvalesilva/wsipre

Handling whole-slide images with region-level annotations.

Language: Jupyter Notebook - Size: 7.55 MB - Last synced at: 2 months ago - Pushed at: over 6 years ago - Stars: 10 - Forks: 5

Kiemen-Lab/CODAvision

CODAvision - open source medical image labeling tool

Language: Python - Size: 39.1 MB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 9 - Forks: 1

seung-lab/tinybrain

Image pyramid generation for grayscale and segmentation image resize.

Language: Python - Size: 1.11 MB - Last synced at: 12 days ago - Pushed at: 2 months ago - Stars: 9 - Forks: 0

kyegomez/SimpleUnet

An simple implementation of Unet because all the implementations i've seen are wayy tooo complicated.

Language: Python - Size: 205 KB - Last synced at: 11 days ago - Pushed at: 7 months ago - Stars: 9 - Forks: 1

sauravmishra1710/Malaria-Detection-Using-Deep-Learning-Techniques

Malaria Parasite Detection using Efficient Neural Ensembles. Malaria, a life threatening disease caused by the bite of the Anopheles mosquito infected with the parasite, has been a major burden towards healthcare for years leading to approximately 400,000 deaths globally every year. This study aims to build an efficient system by applying ensemble techniques based on deep learning to automate the detection of the parasite using whole slide images of thin blood smears.

Language: Jupyter Notebook - Size: 295 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 9 - Forks: 5

seung-lab/data-cube-x Fork of william-silversmith/data-cube-x

JS biomedical 3D image stack. Fast CPU rendering. Easy web app integration.

Language: JavaScript - Size: 16.1 MB - Last synced at: about 1 year ago - Pushed at: over 6 years ago - Stars: 9 - Forks: 1

sondosaabed/DataCamp-Image-Processing-Track

This track covers the fundamentals, from image pre-processing to deep learning. Began with image enhancement, restoration, biomedical images to convolutional neural nets, build powerful deep learning image classifiers.

Size: 2.93 KB - Last synced at: 2 months ago - Pushed at: over 1 year ago - Stars: 8 - Forks: 0

eliashossain001/Bone-Fracture-Detection

Detecting fractures on top of X-ray imaging modalities using various state-of-the-art techniques of deep learning

Language: Jupyter Notebook - Size: 63.1 MB - Last synced at: over 2 years ago - Pushed at: about 3 years ago - Stars: 8 - Forks: 5

Borda/pyBPDL

Binary Pattern Dictionary Learning for gene activation in microscopy images

Language: Python - Size: 9.97 MB - Last synced at: about 1 month ago - Pushed at: over 3 years ago - Stars: 8 - Forks: 1

sauravmishra1710/U-Net---Biomedical-Image-Segmentation

Implementation of the paper titled - U-Net: Convolutional Networks for Biomedical Image Segmentation @ https://arxiv.org/abs/1505.04597

Language: Jupyter Notebook - Size: 11.1 MB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 8 - Forks: 5

SABS-R3-projects/Paint4Brains

A brain MRI segmentation tool that provides accurate robust segmentation of problematic brain regions across the neurodegenerative spectrum. The methodology is generalisable to perform well with the typical variance in MRI acquisition parameters and other factors that influence image contrast.

Language: Python - Size: 230 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 8 - Forks: 0

TylerAdamMartinez/Body-Signals-Filtering

BMEN 3311 (Biomedical Signal Analysis): Reads in biomedical data from a patient’s files into a script and plots the data. Then take the discrete Fourier transforms of each signal then plot the frequency Spectrums. In addition, create a digital notch filter to remove the noise coming from mains power in the ECG signal without creating a phase shift due to filtering (zero-phase filtering), determine if the patient was tired during the recording of the EMG signal based on the frequency spectrum of the EMG signal, and determine the mental state of the patient during the recording of the EEG signal based on the frequency spectrum of the EEG signal. Finally, break down how much of the EEG signal is comprised of the four EEG wave components (Delta, Theta, Alpha and Beta), and display it in a bar graph.

Language: MATLAB - Size: 1.15 MB - Last synced at: 3 months ago - Pushed at: over 3 years ago - Stars: 7 - Forks: 2

ELEKTRONN/ELEKTRONN2

A highly configurable toolkit for training 3D/2D CNNs and general Neural Networks, based on Theano

Language: Python - Size: 1.32 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 7 - Forks: 8

souheib1/Refinement-of-DL-approaches-for-unsupervised-cell-segmentation-classification-on-microfluidic-images

Research internship 2023 at Telecom Paris

Language: Jupyter Notebook - Size: 915 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 0

brainlife/abcd-spec

Application for Big Computational Data Specification (v1.1). This specification provide information on how to write an Application that can run on the open platform

Language: Python - Size: 8.3 MB - Last synced at: about 1 year ago - Pushed at: over 2 years ago - Stars: 6 - Forks: 5

alksarioglou/biomed_imaging

Simulating biomedical imaging modalities (X-Ray, Positron Emission Tomography, Magnetic Resonance Imaging, Ultrasound Imaging) using MATLAB

Language: MATLAB - Size: 4.46 MB - Last synced at: about 2 years ago - Pushed at: over 3 years ago - Stars: 6 - Forks: 1

gabrielziegler3/CoDePPI

Context-dependent Probabilistic Prior Information for Improved Compressed Sensing MRI Reconstruction

Language: Python - Size: 127 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 6 - Forks: 1

drcerenkaya/COVID-19-DetectionV2

COVID-19 Detection Using Chest X-Ray Images and Deep Convolutional Neural Networks

Language: Jupyter Notebook - Size: 57.6 KB - Last synced at: 9 days ago - Pushed at: almost 4 years ago - Stars: 6 - Forks: 6

drcerenkaya/COVID-19-Detection

COVID-19 Detection Using Chest X-Ray Images and Deep Convolutional Neural Networks

Language: Jupyter Notebook - Size: 2.64 MB - Last synced at: 9 days ago - Pushed at: over 4 years ago - Stars: 6 - Forks: 4

IQTLabs/BioNIC 📦

optimizing deep learning for ultra-small biomedical datasets

Language: Jupyter Notebook - Size: 3.83 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 5 - Forks: 1

AdrianBZG/Muscular-Dystrophy-Diagnosis

Code for "A Convolutional Neural Network for the automatic diagnosis of collagen VI-related muscular dystrophies" (Applied Soft Computing, 2019)

Language: Python - Size: 35.6 MB - Last synced at: 2 months ago - Pushed at: over 5 years ago - Stars: 5 - Forks: 1

shubhamkriitr/INFINET-ISEG-2017

Language: Python - Size: 84 KB - Last synced at: about 2 years ago - Pushed at: about 7 years ago - Stars: 5 - Forks: 3

RuiyangJu/YOLOv8_Global_Context_Fracture_Detection

ISPACS 2024

Language: Python - Size: 4.76 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 4 - Forks: 1

GiannisPikoulis/CheXpert

Codebase for automated CXR diagnosis on CheXpert dataset and competition.

Language: Python - Size: 46.9 KB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 0

sweetpand/Tensorflow_Best_practices

Biomedical Image Analysis with TensorFlow and DLTK

Language: Python - Size: 868 KB - Last synced at: 3 months ago - Pushed at: about 5 years ago - Stars: 4 - Forks: 2

fitushar/Quantification-of-Trabeculae-Inside-the-Heart-from-MRI-Using-Fractal-Analysis

In this project, we demonstrate the fractal dimension (FD) and manual segmentation of the Magnetic Resonance Imaging (MRI) of the heart that quantify amount of trabeculae inside the heart.

Language: MATLAB - Size: 20.5 MB - Last synced at: 4 months ago - Pushed at: over 6 years ago - Stars: 4 - Forks: 0

zaaachos/Thesis-Diagnostic-Captioning

BSc Thesis research on Medical Image Captioning [ or Diagnostic Captioning (DC) ]

Language: Python - Size: 69.3 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

reshalfahsi/MSGNet

Modified MobileNet-ShuffleNet-GhostNet Network for Lightweight Retinal Vessel Segmentation

Language: Python - Size: 454 KB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 0

andandandand/evolution-rules-of-deterministic-ca-for-multichannel-brain

CUDA GPU programs and Matlab invocation scripts for variations on the GrowCut cellular automaton.

Language: MATLAB - Size: 855 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 2

pokarats/LAP-final-project

Multimodal Bi-Transformers (MMBT) in Biomedical Text/Image Classification

Language: Jupyter Notebook - Size: 156 MB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 3 - Forks: 0

ceidas/Medical-Imaging-Project

This project was completed in 2018 as a part of my postgraduate studies in Biomedical Engineering

Language: MATLAB - Size: 4.33 MB - Last synced at: about 2 months ago - Pushed at: over 4 years ago - Stars: 3 - Forks: 1

anjanatiha/Malaria-Parasite-Detection-in-Thin-Blood-Smear-Images-with-Convolutional-Neural-Networks

Malaria Detection from Cell Images using Deep Learning - NasNetMobile Model

Language: Jupyter Notebook - Size: 365 KB - Last synced at: 8 days ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 3

awcasella/Calculo-Numerico-UNIFESP-SJC-EngBio

This repository contains all the algorithms studied in discipline "Calculo Numerico" of Biomedical Engineering course at UNIFESP in the second semester of 2018.

Language: MATLAB - Size: 22.5 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 3 - Forks: 1

awcasella/Imagens-Biomedicas-UNIFESP-SJC-EngBio

This repository contains all the image processing algorithms studied in discipline "Imagens Biomédicas" of Biomedical Engineering course at UNIFESP in the first semester of 2017. All the algorithms are written in both MatLab and Python Languages.

Language: MATLAB - Size: 1.68 MB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 3 - Forks: 1

andandandand/fractal-dimension-of-brain-tumors-w-box-counting-algo

Language: Mathematica - Size: 7.2 MB - Last synced at: about 2 years ago - Pushed at: about 9 years ago - Stars: 3 - Forks: 0

ciroraggio/AugmentedDataLoader

Medical image augmentation tool that can be integrated with Pytorch & MONAI.

Language: Python - Size: 4.23 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 2 - Forks: 0

Amirhosein2c/MIP-DDPM

How To Segment in 3D Using 2D Models: Automated 3D Segmentation of Prostate Cancer Metastatic Lesions on PET Volumes Using Multi-Angle Maximum Intensity Projections and Diffusion Models

Language: Jupyter Notebook - Size: 3.28 MB - Last synced at: 2 months ago - Pushed at: 7 months ago - Stars: 2 - Forks: 0

amarrammadhu/Biomedical-Engineering-

My assignments and projects concerned with Biomedical Engineering

Language: TeX - Size: 5.26 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 2 - Forks: 0

emogooo/Biomedical-Data-Processing-with-Image-Filters

Processing biomedical data using LBP, HOG, and Gabor filters for enhanced analysis and feature extraction.

Language: Python - Size: 17.9 MB - Last synced at: 3 months ago - Pushed at: 12 months ago - Stars: 2 - Forks: 0

FilippoCastellani/CaVe

Biomedical Signal Processing & Medical Images - projects realized by a team of students from Politecnico di Milano.

Language: MATLAB - Size: 256 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

MarioPasc/Biomedical_images_first_assignment

This repository contains all the code I've written for the first assignment of the course 'Biomedical Images'

Language: Jupyter Notebook - Size: 10.6 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0

Gaurav0502/retina-multilabel-classification

Retina Disease Detection using Ensemble methods for Multilabel Classification

Language: Jupyter Notebook - Size: 10.7 MB - Last synced at: 2 months ago - Pushed at: about 2 years ago - Stars: 2 - Forks: 0

mendes-davi/biomedical-signal-processing

A collection of mostly MATLAB scripts for Biomedical Signal Processing used and developed for the "Biological Signal Processing" lectures at UnB (Universidade de Brasília, Brazil)

Language: MATLAB - Size: 47.5 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0

awcasella/Engenharia-Medica-Aplicada-UNIFESP-SJC-EngBio

This repository contains all the machine learning algorithms studied in discipline "Engenharia Médica Aplicada" of Biomedical Engineering course at UNIFESP in the second semester of 2018. All the algorithms are written in both MatLab and Python Languages.

Language: MATLAB - Size: 102 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 2

mbalestrat/ECE-FYP-PneumoCheck

rPPG algorithm allowing for estimation of pulse and SpO2 from a video of a patient's face. ECE Final Year Project at Monash University.

Language: MATLAB - Size: 1.03 MB - Last synced at: over 2 years ago - Pushed at: over 5 years ago - Stars: 2 - Forks: 1

ucalyptus/Kaggle-Histopathological-Cancer-Detection-Challenge

Private LB 169/1157

Language: Jupyter Notebook - Size: 1.5 MB - Last synced at: over 2 years ago - Pushed at: almost 6 years ago - Stars: 2 - Forks: 3

radim94/Diploma

Code for my Master's Diploma(June 2018)

Language: Matlab - Size: 1.64 MB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 2 - Forks: 1

rnpnr/ogl_beamforming

Language: C - Size: 920 KB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 1 - Forks: 4

premDelaprem/MRI-tumor-classification

Building CNN models to detect and classify brain tumors using images of MRI scans

Language: Jupyter Notebook - Size: 26.4 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 1 - Forks: 0

SohelRana-aiub-Pro/Biomedical-Engineering-Research-Projects

Artificial intelligence (AI) is gradually changing medical practice. With recent progress in digitized data acquisition, machine learning and computing infrastructure, AI applications are expanding into areas that were previously thought to be only the province of human experts.

Size: 24.4 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 1 - Forks: 0

pathak-ashutosh/liver-segmentation

Segment liver using unet architecture. This was a project I did for a senior anonymously as his final year project during my undergrad.

Language: Jupyter Notebook - Size: 45.9 MB - Last synced at: 4 months ago - Pushed at: 12 months ago - Stars: 1 - Forks: 0

reshalfahsi/contrastive-ssl-pathology

Self-Supervised Contrastive Learning for Colon Pathology Classification

Language: Jupyter Notebook - Size: 1.07 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

jedrzej-put/biomedical_classification

Language: Jupyter Notebook - Size: 232 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

felipe-parodi/neogaze

Repository for "Zero-Shot Classifiers Are Optimal Gaze Estimators During Neonatal Resuscitation"

Language: Jupyter Notebook - Size: 4.9 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 1 - Forks: 0

yasin-peker/Medical-X-Ray-Imaging

In this project, medical X-Ray imaging methods using MATLAB tools are studied. In order to design the model of the X-Ray imaging as software, the X-Ray imaging project is divided into two parts, namely the forward problem and the inverse problem

Language: MATLAB - Size: 2.17 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 1 - Forks: 0

salinaria/dip-course 📦

Digital Image processing course Fall 1401

Language: Jupyter Notebook - Size: 22.6 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

OmarAlkousa/DICOM-Using-Python

How to deal with DICOM files using Python packages, ImageIO and PyDicom

Language: Jupyter Notebook - Size: 14.4 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

nicholasbook/slicevis

A python package for interactive visualization of volumetric slices.

Language: Python - Size: 40.8 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

Thomas-JHR/Biomedical-Image-and-Signal-Processing

Introduction for biomedical image and signal processing

Language: MATLAB - Size: 2.87 MB - Last synced at: over 2 years ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 0

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