cardiac | Topic | Ecosyste.ms: Repos

Topic: "cardiac"

neuropsychology/NeuroKit

NeuroKit2: The Python Toolbox for Neurophysiological Signal Processing

Language: Python - Size: 4.12 GB - Last synced at: 17 days ago - Pushed at: 17 days ago - Stars: 1,852 - Forks: 460

Koma is a Pulseq-compatible framework to efficiently simulate Magnetic Resonance Imaging (MRI) acquisitions. The main focus of this package is to simulate general scenarios that could arise in pulse sequence development.

Language: Julia - Size: 653 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 154 - Forks: 24

Cardiac-MR-Group-Lund/segment-open

Segment Source Distribution

Language: MATLAB - Size: 262 MB - Last synced at: over 2 years ago - Pushed at: almost 3 years ago - Stars: 57 - Forks: 30

HReynaud/EchoDiffusion

MICCAI 2023 code for the paper: Feature-Conditioned Cascaded Video Diffusion Models for Precise Echocardiogram Synthesis. EchoDiffusion is a collection of video diffusion models trained from scratch on the EchoNet-Dynamic dataset with the imagen-pytorch repo.

Language: Python - Size: 59.3 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 55 - Forks: 4

mathpluscode/CineMA

A Vision Foundation Model for Cine Cardiac Magnetic Resonance Imaging

Language: Python - Size: 86.7 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 17 - Forks: 1

qiuhuaqi/cardiac-motion

[STACOM-MICCAI 2019] Deep Learning Registration for Cardiac Motion Tracking

Language: Python - Size: 2.85 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 16 - Forks: 2

starlordvk/Prediction-Of-Cardiac-Arrhythmia

Machine Learning project to predict heart diseases

Language: Python - Size: 2.14 MB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 15 - Forks: 12

julien-zheng/CardiacMotionFlow

Code for the analysis of cardiac motion and cardiac pathology classification

Language: Python - Size: 98.6 KB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 13 - Forks: 6

dpfens/FitnessJS

Exercise Physiology Equations

Language: TypeScript - Size: 4.82 MB - Last synced at: 4 months ago - Pushed at: 11 months ago - Stars: 11 - Forks: 2

cgalaz01/aladdin_cmr_la

Source code for Aladdin, a complete workflow for 3D MRI left atrium motion analysis

Language: Python - Size: 151 MB - Last synced at: 3 months ago - Pushed at: 4 months ago - Stars: 10 - Forks: 1

hellopipu/HQS-Net

Learned Half-Quadratic Splitting Network for Magnetic Resonance Image Reconstruction

Language: Python - Size: 796 KB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 10 - Forks: 1

MRKonrad/tomato

A library to calculate parametric maps in MRI. For details see https://doi.org/10.1016/j.softx.2019.100369

Language: C++ - Size: 101 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 9 - Forks: 3

bcnmedtech/unsupervised_multiple_kernel_learning

This is an implementation of unsupervised multiple kernel learning (U-MKL) for dimensionality reduction, which builds upon a supervised MKL technique by Lin et al (10.1109/TPAMI.2010.183).

Language: Matlab - Size: 37.4 MB - Last synced at: 7 months ago - Pushed at: about 7 years ago - Stars: 8 - Forks: 2

finsberg/fenicsx-pulse

Next generation cardiac mechanics solver based on FEniCSx

Language: Python - Size: 3.06 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 7 - Forks: 2

ComputationalPhysiology/cardiac-geometries

Tool for creating idealised cardiac geometries and microstructure

Language: Python - Size: 6.93 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 7 - Forks: 2

Chaste/ApPredict

Cardiac Action Potential Prediction (ApPredict) under drug-induced block of ion channels. This is a Chaste extension/bolt-on project.

Language: C++ - Size: 38.5 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 7 - Forks: 4

finsberg/fenicsx-beat

Language: Python - Size: 16.5 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 6 - Forks: 2

danihae/SarcAsM

A Python package for AI-based comprehensive analysis of sarcomere structure and function in cardiomyocytes

Language: Python - Size: 538 MB - Last synced at: 24 days ago - Pushed at: 24 days ago - Stars: 6 - Forks: 1

eyalhana/PCMC-T1

Free-breathing myocardial T1 mapping with Physically-Constrained Motion Correction

Language: Python - Size: 420 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 6 - Forks: 3

ImperialCollegeLondon/INDI

INDI is a command line tool to process in-vivo cardiac diffusion tensor imaging.

Language: Python - Size: 19 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 5 - Forks: 2

fcbg-platforms/eeg-cardio-audio-sleep

Project to study sound stimulus synchronous, asynchronous and isochronous with the heartbeat during sleep.

Language: Python - Size: 4.42 MB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 5 - Forks: 4

RaymondCM/UOL-FinalYearProject

GPU implementation of a Full Search Block Matching Motion Estimation Algorithm

Language: C++ - Size: 97.5 MB - Last synced at: 3 months ago - Pushed at: over 7 years ago - Stars: 5 - Forks: 2

jlduan/Reprogram-Seq

Reprogram-Seq: Rational reprogramming of cellular states by combinatorial perturbation

Language: HTML - Size: 391 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 4 - Forks: 1

UK-Digital-Heart-Project/mutools3D

R package for Mass Univariate Analysis of 3D Phenotypes

Language: R - Size: 9.85 MB - Last synced at: 4 months ago - Pushed at: 6 months ago - Stars: 3 - Forks: 4

RealityBending/SussexPhysioProtocol

Sussex Psychophysiology Research Protocol (SuPREP)

Size: 328 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 2

ComputationalPhysiology/mps

Tools for working with mps files

Language: Python - Size: 7.53 MB - Last synced at: 17 days ago - Pushed at: 17 days ago - Stars: 2 - Forks: 0

JosephBrunet/cardiotensor

Toolkit designed for quantifying 3D cardiomyocytes orientations in heart images

Language: Python - Size: 973 MB - Last synced at: 15 days ago - Pushed at: 22 days ago - Stars: 2 - Forks: 3

GlastonburyGroup/CardiacDiffAE_GWAS

Official code for the paper "Unsupervised cardiac MRI phenotyping with 3D diffusion autoencoders reveals novel genetic insights"

Language: Python - Size: 105 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 2 - Forks: 1

PabloLeonor/Coronariac

Coronariac, emulator in java of CARDIAC

Language: Java - Size: 740 KB - Last synced at: 3 months ago - Pushed at: 7 months ago - Stars: 2 - Forks: 0

CAMERA-MRI/SWiM

Scan With Me (SWiM)

Size: 16.1 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 2 - Forks: 0

KibromBerihu/LFBNet

This repository implements a robust deep learning method (LFBNet) for medical image segmentation using a two systems approach. Learning fast and slow strategy for robust medical image analysis.

Language: Python - Size: 279 KB - Last synced at: over 2 years ago - Pushed at: about 3 years ago - Stars: 2 - Forks: 0

zhennongchen/CMR_MC_SR_End2End

An end-to-end deep learning solution to perform motion correction (MC) and super-resolution (SR) concurrently in CMR SAX slices. Author: Zhennong Chen, PhD

Language: Python - Size: 29.6 MB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 1 - Forks: 0

ahannum/dwi_phase

Repository for Code related to "Phase Stabilization with Motion Compensated Diffusion Weighted Imaging" manuscript.

Language: Jupyter Notebook - Size: 230 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 1 - Forks: 0

frederic-perez/Cardiac-electrophysiology

Learning about elucidating, diagnosing, and treating the electrical activities of the heart

Size: 394 KB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 2

rockingbapidas/hearrate

Check heart rate using the phone camera

Language: Kotlin - Size: 9.73 MB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 2

SPEREZB/Cardiac-Sensor-Web

Application to measure the user's heart rate

Language: SCSS - Size: 2.98 MB - Last synced at: 6 days ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

ziyuanli17/MrMesh

Automatically generate cardiac segmentations, contours, and meshes from SAX MR images

Language: Python - Size: 124 MB - Last synced at: almost 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0

ComputationalPhysiology/pulse_adjoint

An adjointable cardiac mechanics data assimilator.

Language: Python - Size: 16.9 MB - Last synced at: 4 months ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

c-tous/cardiac-diffusion-MRI

cDWI, cDTI, cardiacDTI, design of DWI sequences (SE, STEAM, TRSE), gradient sampling shells, processing helix angle (HA), sheet angle (E2A, SA), transverse angle (TA)

Language: Mathematica - Size: 2.28 MB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 2

ComputationalPhysiology/cardiac-geometries-core

Gmsh files for cardiac geometries

Language: Python - Size: 83 KB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 0 - Forks: 0

bisacciamd/cviBaker

Reads and digests («bakes») batches of Circle CVi reports in XML format and outputs to a bespoke RedCAP template.

Language: R - Size: 938 KB - Last synced at: 5 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0

dawidprosba/arduino-heart-lub-dub

A library made in CPP for Arduino for simulating heart beat lub dub. You can connect your LEDs or Motors to flash to a sound of LUB and DUB of a heartbeat.

Language: C++ - Size: 17.6 KB - Last synced at: 3 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

bk75R/PHE_NASSS_Cardiac

Extracting and tidying up data from graphs in the National Ambulance Syndromic Surveillance System (England)

Language: R - Size: 25.6 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

shah-in-boots/hrd

Mapping the heart

Language: R - Size: 8.23 MB - Last synced at: 21 days ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

Alsweider/Pulsrechner

Trainingspuls-Berechnung nach den Formeln von Lagerstrøm und Karvonen mit graphischer Benutzeroberfläche für Windows.

Language: C++ - Size: 260 KB - Last synced at: 6 days ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

dzauski585/Starling_Curve

Final project for CS50P. Plots a patient on to the starling curve for clinical decision making

Language: Python - Size: 74.2 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

deu439/BOF

Source code supplementing the ICASSP 2023 paper "Bayesian Methods For Optical Flow Estimation Using a Variational Approximation, With Application to Ultrasound"

Language: C - Size: 36.1 KB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

Cardio-AI/cmr-phase-detection

Self-supervised method for cardiac phase detection in 4D CMR. Model consists of a deformable registration part, the derivation of the per-voxel deformation angle and a rule-set based on the physiological properties of a contracting ventricle. Implemented in TF2.X. Koehler et al. 2022, STACOM workshop @ MICCAI

Language: Jupyter Notebook - Size: 47.9 MB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

WrightGroupSRI/ep-dataset

Sample MR and artificial electrophysiology data that can be used with vurtigo

Size: 51 MB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0

PrathamLearnsToCode/Medical_Images_Pytorch

Computer Vision with PyTorch for Medical Image Analysis

Language: Jupyter Notebook - Size: 871 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

rbonazzola/pytorch_coma Fork of pixelite1201/pytorch_coma

Reimplementation of CoMA to be used for dimensionality reduction of cardiac meshes.

Size: 3.28 MB - Last synced at: over 2 years ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 1