dti | Topic | Ecosyste.ms: Repos

Topic: "dti"

PaddlePaddle/PaddleHelix

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

Language: Python - Size: 133 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 1,078 - Forks: 229

DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

Language: Python - Size: 72.5 MB - Last synced at: about 17 hours ago - Pushed at: 5 days ago - Stars: 774 - Forks: 446

jibikbam/CNN-3D-images-Tensorflow

3D image classification using CNN (Convolutional Neural Network)

Language: Python - Size: 9.77 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 253 - Forks: 111

dfsp-spirit/fsbrain

R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data for individuals and groups.

Language: R - Size: 375 MB - Last synced at: 28 days ago - Pushed at: 8 months ago - Stars: 71 - Forks: 13

mfroeling/QMRITools

Processing and visualization tools for quantitative MRI data

Language: Mathematica - Size: 589 MB - Last synced at: 7 days ago - Pushed at: 9 days ago - Stars: 67 - Forks: 17

BlueBrain/BioExplorer

The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration

Language: C++ - Size: 444 MB - Last synced at: about 1 month ago - Pushed at: 8 months ago - Stars: 65 - Forks: 11

hypermodules/dti 📦

:electron: command-line electron devtools installer

Language: JavaScript - Size: 22.5 KB - Last synced at: 7 months ago - Pushed at: about 6 years ago - Stars: 34 - Forks: 2

deargen/mt-dti

An official Molecule Transformer Drug Target Interaction (MT-DTI) model

Language: Python - Size: 43 KB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 31 - Forks: 19

dfsp-spirit/freesurferformats

GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.

Language: R - Size: 7.48 MB - Last synced at: 2 days ago - Pushed at: 3 months ago - Stars: 23 - Forks: 4

lrq3000/csg_mri_pipelines

MRI preprocessing and analysis pipelines and tools for the study of disorders of consciousness

Language: Jupyter Notebook - Size: 30.6 MB - Last synced at: about 2 hours ago - Pushed at: 5 months ago - Stars: 18 - Forks: 8

Hyedryn/elikopy

ElikoPy is Python library aiming at easing the processing of diffusion imaging for microstructural analysis.

Language: Python - Size: 4.29 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 17 - Forks: 5

Neurita/pypes

Reusable neuroimaging pipelines using nipype

Language: Python - Size: 4.37 MB - Last synced at: 3 months ago - Pushed at: about 6 years ago - Stars: 17 - Forks: 7

sameerd/DiffusionTensorImaging

Single Shell Free Water Elimination Model for Diffusion Tensor Imaging

Language: Jupyter Notebook - Size: 59.9 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 16 - Forks: 7

Andoryuuta/MHW-ClassPropDump

An application to dump DTI type information from Monster Hunter: World

Language: C++ - Size: 19.7 MB - Last synced at: 20 days ago - Pushed at: about 1 year ago - Stars: 13 - Forks: 2

dfsp-spirit/NeuroFormats.jl

Handling of structural neuroimaging file formats for Julia.

Language: Julia - Size: 6.23 MB - Last synced at: 3 months ago - Pushed at: 8 months ago - Stars: 12 - Forks: 2

wangruinju/Double-Fusion

A bayesian approach to examining default mode network functional connectivity and cognitive performance in major depressive disorder

Language: Python - Size: 4.74 MB - Last synced at: 9 months ago - Pushed at: almost 6 years ago - Stars: 12 - Forks: 2

marcogovoni/TracceDigitali

OSINT: come iniziare. Strumenti e idee per raccogliere e analizzare fonti aperte.

Size: 192 KB - Last synced at: 12 months ago - Pushed at: over 4 years ago - Stars: 10 - Forks: 2

cwatson/mri_library

Scripts for MRI preprocessing

Language: Shell - Size: 146 KB - Last synced at: 3 months ago - Pushed at: almost 5 years ago - Stars: 10 - Forks: 2

zhanglu-cst/Drug-Target-Interaction

Predict whether the protien sequence and the drug SMILES will be interact with each other

Language: Python - Size: 61.7 MB - Last synced at: over 2 years ago - Pushed at: over 6 years ago - Stars: 10 - Forks: 0

zhiyunl/CAM-dMRI

Weakly Object Localization on brain dMRI using CAM

Language: Jupyter Notebook - Size: 283 MB - Last synced at: over 1 year ago - Pushed at: about 4 years ago - Stars: 7 - Forks: 0

dicemt/DTI-NODDI

:brain: DTI-NODDI: Create NODDI maps from DTI (either "FA and MD" or "L1, L2, and L3")

Language: Python - Size: 23.4 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 6 - Forks: 6

jibikbam/DTI-process-analysis

Preprocess and analyze DTI (3D medical image)

Language: Matlab - Size: 14.6 KB - Last synced at: over 2 years ago - Pushed at: over 8 years ago - Stars: 6 - Forks: 1

jibikbam/Download-and-organize-MRI-data-in-bash

Download and organize MRI data efficiently in shell

Language: Shell - Size: 3.91 KB - Last synced at: over 2 years ago - Pushed at: over 8 years ago - Stars: 5 - Forks: 0

fartmonsterrbx/ropro-rex-free

get ropro rex for free with a server sniper in it

Language: JavaScript - Size: 3.2 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 4 - Forks: 2

DGWhittaker/Rat-FK3V-files

Rat Fenton-Karma C code and 3D DTI-based geometry files

Language: C - Size: 59.2 MB - Last synced at: almost 2 years ago - Pushed at: almost 5 years ago - Stars: 3 - Forks: 2

zoro-jiang/DTI_ALPS

diffusion tensor image analysis along the perivascular space (DTI‐ALPS) ：a program package for calculating DTI-ALPS

Language: Jupyter Notebook - Size: 19.5 KB - Last synced at: 16 days ago - Pushed at: 17 days ago - Stars: 2 - Forks: 0

miroslav-reiter/Vedenie_Bakalarske_Diplomove_DPS_Prace

📔 Online Kurz Vedenie Bakalárskych a Diplomových Prác + DPŠ

Size: 59.6 MB - Last synced at: 3 days ago - Pushed at: 25 days ago - Stars: 2 - Forks: 14

igemiracle/Drug-Target-Interaction-Prediction

Predictive Modelling of Drug Target Interaction: CNN/MPNN/Transformer

Language: Python - Size: 703 KB - Last synced at: 3 months ago - Pushed at: 5 months ago - Stars: 2 - Forks: 1

JDM-Github/debahra-efficio

DEHBARA (Efficio) is a React and Express-based web application designed to streamline service requests for DTI, SSS, and other document processing needs. It simplifies the process of requesting official papers and services, integrating cloud storage for efficient data management.

Language: TypeScript - Size: 14.7 MB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 1 - Forks: 0

Amirreza-Mousavi/Aspartate_Racemase_Ligands_Simlarity_Score

An R script that uses MACCS166 chemical fingerprint and calculates Jaccard Index/Tanimoto Coefficient for a list of Aspartate Racemase Ligands

Language: R - Size: 32.2 KB - Last synced at: 9 months ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 1

kodiweera/difit

A diffusion MRI models fitting software

Language: Python - Size: 117 KB - Last synced at: 3 days ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0

Amirreza-Mousavi/Protein_Normalized_SW_Similarity_Score

An R script that calculates a similarity matrix for a list of protein sequences with the aid of Bleakley-Yamanishi Normalized Smith-Waterman Similarity Score.

Language: R - Size: 8.35 MB - Last synced at: 9 months ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0

c-tous/cardiac-diffusion-MRI

cDWI, cDTI, cardiacDTI, design of DWI sequences (SE, STEAM, TRSE), gradient sampling shells, processing helix angle (HA), sheet angle (E2A, SA), transverse angle (TA)

Language: Mathematica - Size: 2.28 MB - Last synced at: about 1 year ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 2

iTrauco/digital-transformation-initiatives

A Collection of Empirical White Papers on Digital Transformation Initiatives(DTI) Published since Q1FY2018.

Size: 4.02 MB - Last synced at: 5 months ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 0

banctilrobitaille/BrainGym

A toolkit for developing reinforcement algorithm for diffusion weighted image analysis.

Size: 1.95 KB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 1 - Forks: 0

bm777/dti

DATA Incubator challenge 2019 - DATA SCIENCE

Size: 1000 Bytes - Last synced at: 5 months ago - Pushed at: almost 6 years ago - Stars: 1 - Forks: 0

phildean/SPM_DiffusionII_Toolbox_BatchScript

Script for running sucbjects through DiffusionII Toolbox in SPM

Language: MATLAB - Size: 29.3 KB - Last synced at: almost 2 years ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 1

dipy/workshop.dipy.org

The DIPY Workshop website

Language: CSS - Size: 43.3 MB - Last synced at: 16 days ago - Pushed at: 16 days ago - Stars: 0 - Forks: 2

Cescualito/UCT_DCHS_PhD

This study investigates the impact of maternal HIV status on child brain development via immune changes. It explores if peripheral blood immune trajectories link to neuroimaging and neurodevelopmental alterations in HIV-exposed, uninfected children.

Size: 21.5 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 0 - Forks: 0

pradhanhitesh/neuroimaging-resources

Language: Python - Size: 7.46 MB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 0

CSIM-Toolkits/SlicerDiffusionComplexityMap

Slice module to offer the Diffusion Complexity Map algorithm

Language: C++ - Size: 350 KB - Last synced at: 9 months ago - Pushed at: 9 months ago - Stars: 0 - Forks: 1

c-tous/MSK-diffusion-MRI

Musculoskeletal MRI: diffusion tensor imaging, tractography, orientation distribution function, elevation and pennation angle, torsional shear models, with data set available

Size: 116 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

Ali-Mohammadnezhad/Diffusion-MRI-DTI-Preprocessing

Code snippets for preprocessing DTI/MRI neuroimaging data

Language: Shell - Size: 326 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

stefanomoriconi/PolarimetricTensorImaging

Generate Polarimetric Tensor Imaging (PTI) together with an Embedded DEMO for Visualisation and Interaction in 3D Slicer.

Size: 16.8 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0

reachananya/Early-diagnosis-of-Alzheimer-via-DL

Alzheimer disease is one of the most common neuro-degenerative diseases, with an estimated 6.2 million cases in the United States. This research investigates the potential of Transformer-based deep learning techniques to accelerate the processing of diffusion tensor imaging (DTI) measures and improve the early diagnosis of AD using Sparse Data

Size: 49.8 KB - Last synced at: about 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

micerr/Epilepsy-dMRI-VNS

Assessing microstructural brain differences in epileptic patients with vagus nerve stimulation via diffusion MRI, tractography and machine learning

Language: Jupyter Notebook - Size: 270 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

Gilgamesh60/Binding_affinity_predictor

This is a project for predicting the protein-ligand binding affinity using gnns and attention mechanism .

Language: Jupyter Notebook - Size: 1.86 MB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

jinunyachhyon/Drug-Target-Integration Fork of mridul3301/Drug-Target-Integration

Our model predicts binding affinity across a diverse set of drugs and target groups. Drug-target interaction prediction task aims to predict the interaction activity score in silico given only the accessible compound structural information and protein amino acid sequence.

Language: Jupyter Notebook - Size: 14.6 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0