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Topic: "dti-prediction"

kexinhuang12345/DeepPurpose

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

Language: Jupyter Notebook - Size: 14.5 MB - Last synced at: 29 days ago - Pushed at: 11 months ago - Stars: 1,028 - Forks: 282

THinnerichs/DTI-VOODOO

A PPI network driven approach to drug-target-interaction prediction using deep graph learning methods.

Language: TeX - Size: 406 MB - Last synced at: 5 months ago - Pushed at: over 3 years ago - Stars: 9 - Forks: 2

Amirreza-Mousavi/Aspartate_Racemase_Ligands_Simlarity_Score

An R script that uses MACCS166 chemical fingerprint and calculates Jaccard Index/Tanimoto Coefficient for a list of Aspartate Racemase Ligands

Language: R - Size: 32.2 KB - Last synced at: 6 months ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 1

Amirreza-Mousavi/Protein_Normalized_SW_Similarity_Score

An R script that calculates a similarity matrix for a list of protein sequences with the aid of Bleakley-Yamanishi Normalized Smith-Waterman Similarity Score.

Language: R - Size: 8.35 MB - Last synced at: 6 months ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0

Amirreza-Mousavi/Aspartate_Racemase_Ligands_Bioactivity_Prediction

This scripts tries to predict the bioactivity of 131 compounds related to Aspartate Racemase enzyme with the aid of decision trees and SVM

Language: R - Size: 27.3 KB - Last synced at: 6 months ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0