single-cell-rna-seq 3 single-cell 3 bioinformatics 2 annotation-tool 2 cell-biology 2 scrnaseq 1 scrna-seq 1 cell-type-classification 1 cell-type-identification 1 supervised-classification-methods 1 batch-correction 1 denoising 1 embeddings 1 gene-regulatory-network 1 large-cell-models 1 large-language-models 1 llms 1 open-source 1 rnaseq 1 zero-imputation 1 zero-shot-learning 1 seurat 1 spatialtranscriptomics 1 bioinformatics-algorithms 1 bioinformatics-analysis 1 bioinformatics-tool 1 feature-selection 1 opensource 1 rna-seq 1 rna-seq-analysis 1 classification 1 harmonization 1 machine-learning 1 ngs-analysis 1 scalability 1 digital-pathology 1 groovy-script 1 masked-image-modeling 1 qupath 1 qupath-script 1 classification-algorithm 1