clinical-decision-support | Topic

Topic: "clinical-decision-support"

frankkramer-lab/MIScnn

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning

Language: Python - Size: 133 MB - Last synced at: 2 days ago - Pushed at: about 2 years ago - Stars: 417 - Forks: 116

cqframework/clinical_quality_language

Clinical Quality Language (CQL) is an HL7 specification for the expression of clinical knowledge that can be used within both the Clinical Decision Support (CDS) and Clinical Quality Measurement (CQM) domains. This repository contains complementary tooling in support of that specification.

Language: Java - Size: 29.6 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 289 - Forks: 130

cds-hooks/docs

CDS Hooks website & specification

Language: Procfile - Size: 15.4 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 171 - Forks: 65

VectorInstitute/cyclops

A toolkit for evaluating and monitoring AI models in clinical settings

Language: Python - Size: 27.1 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 85 - Forks: 13

imedslab/OAProgression

Multimodal Machine Learning-based Knee Osteoarthritis Progression Prediction from Plain Radiographs and Clinical Data

Language: Python - Size: 1.27 MB - Last synced at: 5 months ago - Pushed at: over 3 years ago - Stars: 80 - Forks: 20

cqframework/cql-execution

A JavaScript framework for executing CQL

Language: JavaScript - Size: 11.9 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 74 - Forks: 34

cqframework/CQL-Formatting-and-Usage-Wiki

A collaborative workspace for the development of CQL formatting conventions and usage patterns for artifact development. The home of Cooking with CQL Examples, visit the wiki for more.

Language: HTML - Size: 24.1 MB - Last synced at: 8 days ago - Pushed at: 8 days ago - Stars: 66 - Forks: 25

cqframework/cqf-ruler

FHIR Clinical Reasoning Module Server

Language: Java - Size: 30.7 MB - Last synced at: 3 days ago - Pushed at: 16 days ago - Stars: 66 - Forks: 50

frankkramer-lab/aucmedi

a framework for Automated Classification of Medical Images

Language: Python - Size: 35.5 MB - Last synced at: 12 days ago - Pushed at: 15 days ago - Stars: 41 - Forks: 14

bioinformatics-ua/GenericCDSS

GenericCDSS is a web-based application, which provides the main dashboard where professionals (e.g, practitioners, nurses) can follow all the patients that are under their responsibility and some details about the state of each one.

Language: Python - Size: 18.6 MB - Last synced at: 3 months ago - Pushed at: over 6 years ago - Stars: 41 - Forks: 10

cqframework/clinical-reasoning

CQF Clinical Reasoning on FHIR for Java

Language: Java - Size: 31.8 MB - Last synced at: 3 days ago - Pushed at: 4 days ago - Stars: 40 - Forks: 35

AHRQ-CDS/AHRQ-CDS-Connect-Authoring-Tool

The CDS Authoring Tool is part of the CDS Connect project https://cds.ahrq.gov/, sponsored by the Agency for Healthcare Research and Quality (AHRQ), and developed under contract with AHRQ by MITRE's CAMH FFRDC.

Language: JavaScript - Size: 65.2 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 40 - Forks: 18

awell-health/awell-score

A package of clinically validated score calculations designed for easy integration into proprietary software systems.

Language: TypeScript - Size: 38.3 MB - Last synced at: 3 months ago - Pushed at: 4 months ago - Stars: 28 - Forks: 7

HaojiHu/Sets2Sets

Sequential sets to sequential sets learning

Language: Python - Size: 3.48 MB - Last synced at: over 2 years ago - Pushed at: over 3 years ago - Stars: 27 - Forks: 10

AHRQ-CDS/AHRQ-CDS-Connect-CQL-SERVICES

The AHRQ CDS CQL Services tool is part of the CDS Connect project https://cds.ahrq.gov/, sponsored by the Agency for Healthcare Research and Quality (AHRQ), and developed under contract with AHRQ by MITRE's CAMH FFRDC. The CQL Services tool is an Express.js application for exposing CQL CDS through custom RESTful APIs and CDS Hooks APIs.

Language: JavaScript - Size: 30.4 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 25 - Forks: 7

HL7/cql

Clincal Quality Language Specification

Language: HTML - Size: 217 MB - Last synced at: about 6 hours ago - Pushed at: 1 day ago - Stars: 22 - Forks: 17

WorldHealthOrganization/smart-anc

WHO Antenatal Care Guidelines IG

Language: Liquid - Size: 450 MB - Last synced at: 24 days ago - Pushed at: 24 days ago - Stars: 22 - Forks: 17

sigven/cacao

Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer

Language: R - Size: 20.4 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 21 - Forks: 4

AHRQ-CDS/AHRQ-CDS-Connect-PAIN-MANAGEMENT-SUMMARY

The AHRQ CDS Pain Management Summary tool is part of the CDS Connect project https://cds.ahrq.gov/, sponsored by the Agency for Healthcare Research and Quality (AHRQ), and developed under contract with AHRQ by MITRE's CAMH FFRDC. The CDS Pain Management Summary tool is a SMART on FHIR dashboard for managing pain.

Language: JavaScript - Size: 11.5 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 17 - Forks: 13

HL7/cqf-recommendations

Representation of Clinical Practice Guideline Recommendations in FHIR

Language: GLSL - Size: 377 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 16 - Forks: 11

radioxoma/heval

Medical calculator for intensive care unit

Language: Python - Size: 430 KB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 12 - Forks: 1

AHRQ-CDS/AHRQ-CDS-Connect-API

The AHRQ CDS Connect API (https://cds.ahrq.gov/cds_api) is part of the CDS Connect project, sponsored by the Agency for Healthcare Research and Quality (AHRQ), and developed under contract with AHRQ by MITRE's CAMH FFRDC.

Language: PHP - Size: 125 KB - Last synced at: almost 2 years ago - Pushed at: almost 5 years ago - Stars: 9 - Forks: 0

CEOsys/grevaluator

Prototype of a clinical decision support system based on automated integration of clinical guidelines with real-time clinical data

Language: Python - Size: 925 KB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 8 - Forks: 0

cqframework/opioid-cds

Opioid Prescribing Support Implementation Guide

Language: HTML - Size: 603 MB - Last synced at: 5 months ago - Pushed at: almost 3 years ago - Stars: 8 - Forks: 2

HL7/fhir-qi-core

Quality Improvement Core FHIR Profiles

Language: HTML - Size: 552 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 7 - Forks: 19

WorldHealthOrganization/smart-core

WHO Core Implementation Guide

Language: Batchfile - Size: 147 MB - Last synced at: 5 months ago - Pushed at: about 1 year ago - Stars: 7 - Forks: 5

Andreater/NeuroPGx

A clinical decision-support system to identify pharmacogenomics profiles based on subjects genotype of five core genes. The paper has been published in the Journal of Personalized Medicine.

Language: R - Size: 780 KB - Last synced at: almost 2 years ago - Pushed at: almost 4 years ago - Stars: 7 - Forks: 0

yeahshow/word2vec_medical_record

Using NLP and RNN to build a clinical decision support model, taking input of structured medical record text (SOAP style records)

Language: Jupyter Notebook - Size: 63.4 MB - Last synced at: over 2 years ago - Pushed at: about 7 years ago - Stars: 7 - Forks: 0

csinva/clinical-rule-survey

Analyzing clinical decision instruments through the lens of data and large language models.

Size: 115 MB - Last synced at: 4 months ago - Pushed at: 5 months ago - Stars: 6 - Forks: 0

dermatologist/ctakes-spring-boot 📦

Apache cTakes for clinical document annotation packaged as a spring-boot app with REST api

Language: Java - Size: 70.3 KB - Last synced at: over 2 years ago - Pushed at: over 5 years ago - Stars: 5 - Forks: 1

MolecularMatch/mm-public-scripts

Short scripts to demonstrate data available from MolecularMatch API (api key needed). Data includes clinical trials, drugs, publications, molecular information, bioinformatics, report generation and more.

Language: Python - Size: 16.5 MB - Last synced at: over 2 years ago - Pushed at: over 4 years ago - Stars: 4 - Forks: 1

Shen-Lab/WSR-PredictPofPathogenicity

A weakly supervised regression approach to directly predict the probability of pathogenicity based on categorized pathogenicity classes

Language: Python - Size: 856 KB - Last synced at: about 1 year ago - Pushed at: about 6 years ago - Stars: 4 - Forks: 5

cqframework/opioid-cds-logic

Opioid Prescribing Support Logic Source

Language: Java - Size: 603 KB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 3 - Forks: 0

cqframework/cqf

Common Assets for use in CQFramework Content Implementation Guides

Language: Liquid - Size: 1.39 MB - Last synced at: 5 months ago - Pushed at: 5 months ago - Stars: 2 - Forks: 1

cqframework/lcs-cds

Lung Cancer Screening Clinical Decision Support

Language: Liquid - Size: 77 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 2 - Forks: 4

cptbern/COSAscore

Prognostic risk stratification tools for Covid-19 patients

Size: 1010 KB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 2 - Forks: 0

math-a3k/covid-ht

covid-ht aims to provide a tool for implementing an AI layer on clinical classification effectively in order to improve detection, information availability and resource efficiency in medical environments.

Language: Python - Size: 901 KB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 2 - Forks: 3

mdbasit897/clinical-bp-prediction-ehr

Clinical blood pressure prediction from EHR data with external validation across MIMIC-III and eICU databases. Features Bayesian optimization, uncertainty quantification, and rigorous data leakage prevention for clinical deployment.

Language: Python - Size: 13.4 MB - Last synced at: 3 days ago - Pushed at: 4 days ago - Stars: 1 - Forks: 0

csisc/MedCYN

An interactive web tool for clinical decision support based on Wikidata Query Service

Language: HTML - Size: 324 KB - Last synced at: 15 days ago - Pushed at: 15 days ago - Stars: 1 - Forks: 0

junayed-hasan/LLM-Aggregated-Ensemble-Clinical-Outcomes

Implementation of a novel method using aggregated ensembles of large language models to analyze long clinical texts. Addresses input length limitations and data source diversity in clinical outcome prediction. Includes experiments on mortality prediction and length of stay estimation using MIMIC-III data.

Language: Jupyter Notebook - Size: 4.7 MB - Last synced at: 5 months ago - Pushed at: 10 months ago - Stars: 1 - Forks: 0

itissismail/cds-hook-sample

CDS (Clinical Decision Support) Hook Service allow EHR to communicate with external services

Language: TypeScript - Size: 7.82 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

WorldHealthOrganization/smart-fp

Language: Batchfile - Size: 86.9 MB - Last synced at: 5 months ago - Pushed at: about 2 years ago - Stars: 1 - Forks: 2

luismendes070/angular-portal-starter-project

Created with StackBlitz ⚡️

Language: TypeScript - Size: 7.81 KB - Last synced at: 2 months ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0

innershell/food-diary

Physician food diary requisitions for patients at a weight management clinic. Patients journal their meals over n-days and electronically submit the their diary to their primary care physician for assessment and plan.

Language: Vue - Size: 341 KB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0

WorldHealthOrganization/smart-sti

Language: Batchfile - Size: 85.1 MB - Last synced at: about 1 month ago - Pushed at: about 3 years ago - Stars: 1 - Forks: 0

ToniG14/Reasoning_CDSS

🏥 Clinical Decision Support System for Pulmonary Embolism - An agent-based AI system using LLMs and RAG to assist healthcare professionals with evidence-based PE diagnosis and treatment recommendations.

Language: Jupyter Notebook - Size: 5.46 MB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 0 - Forks: 0

Marcao02/Marcao02.github.io

Marcos Da Silveira Homepage

Language: HTML - Size: 31.3 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 0 - Forks: 0

shainamackin/nyc-hh_algorithmic-bias-mitigation

The code presented here is meant to accompany our Playbook, which illustrates our threshold adjustment methodology that can mitigate bias in EHR-based classification models. Our paper and the Playbook can be found in npj Digital Medicine at the link below:

Size: 6.73 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 1

konkalaitzidis/cpr-ai

An ML-powered clinical pathway recommendation system that helps healthcare providers determine the most appropriate next procedure for patients based on their demographics and conditions. Built as part of the Applied AI in Healthcare course at Karolinska Institutet.

Language: Python - Size: 11.3 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 0 - Forks: 0

SuryaVamsi-P/Diabetic-Retinopathy-Detection-with-ResNet50

Built an end-to-end deep learning pipeline using ResNet-50 to classify retinal images into five stages of Diabetic Retinopathy. Applied transfer learning, image preprocessing, and AUC-based evaluation on the APTOS 2019 Kaggle dataset, achieving a 94% validation AUC—offering real-world potential in clinical diagnosis automation.

Language: Python - Size: 2.15 MB - Last synced at: 28 days ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0

visibilia/IA-for-fully-automatic-COVID-19-detection

FADCIL is a cutting-edge deep learning framework based on YOLO and 3D U-Net, designed for the automatic detection of COVID-19 from chest CT scans. This repository provides the source code for FADCIL, which identifies and quantifies lung lesions caused by COVID-19 with high precision, differentiating them from other pulmonary diseases.

Language: Python - Size: 538 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

RadhikaG1604/Predicting_Hospital_Readmissions

The project aimed to develop a machine learning model to predict hospital readmissions for patients with diabetes.

Size: 5.78 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

goinvo/arpa-h

Real-time clinical guidance for mobile health workers.

Size: 21.9 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

curedao/.github

CureDAO is a decentralized alliance of individuals, government, businesses, and nonprofits devoted to the minimization of suffering.

Size: 24.4 KB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0

Andreater/WARE-AMD-Tool

A clinical decision-support system for Age-Related Macular Degeneration (AMD) based on genetic and non-genetic features. The paper has been published in the Journal of Personalized Medicine.

Language: R - Size: 1.51 MB - Last synced at: over 2 years ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

curedao/constitution

Size: 36.2 MB - Last synced at: about 1 year ago - Pushed at: about 3 years ago - Stars: 0 - Forks: 0

Genomic-Medicine-Linkoping/var-genes-ro

Virulence and Antibiotic Resistance Genes used with JASEN pipeline at the university hospital of Linköping, Sweden.

Language: Jupyter Notebook - Size: 506 KB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

andremadsen/XGBoost_Machine_Learning

[R code] xgboost to classify female puberty status from the endocrine profile feature variable:

Language: R - Size: 4.88 KB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0

cqframework/Lung-CCG Fork of goelalex/Lung-CCG

Lung Disease Pathway Computable Care Guideline Draft. Includes fake patient example

Language: HTML - Size: 1.82 MB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0