Topic: "doi"
papis/papis
Powerful and highly extensible command-line based document and bibliography manager.
Language: HTML - Size: 7.99 MB - Last synced at: 8 days ago - Pushed at: 9 days ago - Stars: 1,563 - Forks: 110
jimmc414/onefilellm
Specify a github or local repo, github pull request, arXiv or Sci-Hub paper, Youtube transcript or documentation URL on the web and scrape into a text file and clipboard for easier LLM ingestion
Language: Python - Size: 937 KB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 1,463 - Forks: 138
titipata/pubmed_parser
:clipboard: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset
Language: Python - Size: 60.4 MB - Last synced at: 3 days ago - Pushed at: about 1 month ago - Stars: 691 - Forks: 177
manubot/rootstock
Clone me to create your Manubot manuscript
Language: HTML - Size: 7.5 MB - Last synced at: 5 months ago - Pushed at: 9 months ago - Stars: 460 - Forks: 188
engnadeau/pybotics ๐ฆ
The Python Toolbox for Robotics
Language: Python - Size: 6.08 MB - Last synced at: 3 days ago - Pushed at: 11 months ago - Stars: 349 - Forks: 63
codemeta/codemeta
Minimal metadata schemas for science software and code, in JSON-LD
Language: Python - Size: 9.97 MB - Last synced at: 2 days ago - Pushed at: 30 days ago - Stars: 328 - Forks: 93
mkucej/i-librarian-free
I, Librarian - open-source version of a PDF managing SaaS.
Language: PHP - Size: 10.8 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 302 - Forks: 30
greenelab/scihub
Source code and data analyses for the Sci-Hub Coverage Study
Language: Jupyter Notebook - Size: 18.3 MB - Last synced at: 4 months ago - Pushed at: over 4 years ago - Stars: 296 - Forks: 39
xlcnd/isbnlib
python library to validate, clean, transform and get metadata of ISBN strings (for devs).
Language: Python - Size: 1.7 MB - Last synced at: 8 days ago - Pushed at: about 1 year ago - Stars: 269 - Forks: 34
Tishacy/SciDownl
An unofficial api for downloading papers from SciHub via DOI, PMID, title
Language: Python - Size: 253 KB - Last synced at: about 2 months ago - Pushed at: over 1 year ago - Stars: 267 - Forks: 49
dsfsi/covid19za
Coronavirus COVID-19 (2019-nCoV) Data Repository and Dashboard for South Africa
Language: Jupyter Notebook - Size: 87.4 MB - Last synced at: 4 months ago - Pushed at: almost 2 years ago - Stars: 254 - Forks: 199
sckott/habanero
client for Crossref search API
Language: Python - Size: 35 MB - Last synced at: 6 days ago - Pushed at: about 2 months ago - Stars: 230 - Forks: 31
xlcnd/isbntools
python app/framework for 'all things ISBN' including metadata, descriptions, covers...
Language: Python - Size: 1.56 MB - Last synced at: about 2 months ago - Pushed at: over 2 years ago - Stars: 229 - Forks: 22
bibcure/scihub2pdf
Downloads pdfs via a DOI number, article title or a bibtex file, using the database of libgen(sci-hub) , arxiv
Language: Python - Size: 1.29 MB - Last synced at: 6 days ago - Pushed at: about 5 years ago - Stars: 213 - Forks: 42
bibcure/bibcure
Bibcure helps in boring tasks by keeping your bibfile up to date and normalized...also allows you to easily download all papers inside your bibtex
Language: Python - Size: 3.29 MB - Last synced at: 17 days ago - Pushed at: over 2 years ago - Stars: 204 - Forks: 17
bibcure/doi2bib
get the bibtex string given a doi
Language: Python - Size: 44.9 KB - Last synced at: 10 days ago - Pushed at: almost 3 years ago - Stars: 196 - Forks: 29
ropensci/rcrossref
R client for various CrossRef APIs
Language: R - Size: 44.9 MB - Last synced at: 1 day ago - Pushed at: 16 days ago - Stars: 175 - Forks: 21
shaunabanana/intrigue
Organize literature into ideas, fast.
Language: Vue - Size: 9.8 MB - Last synced at: 16 days ago - Pushed at: over 1 year ago - Stars: 175 - Forks: 3
perrette/papers
Command-line tool to manage bibliography (pdfs + bibtex)
Language: Python - Size: 13.5 MB - Last synced at: 22 days ago - Pushed at: 3 months ago - Stars: 153 - Forks: 24
pudding0503/github-badge-collection
Github README ๅธธ็จๅพฝ็ซ ๅๅพ่กจๅ้
Size: 641 KB - Last synced at: 3 months ago - Pushed at: 5 months ago - Stars: 139 - Forks: 22
kermitt2/biblio-glutton
A high performance bibliographic information service: https://biblio-glutton.readthedocs.io
Language: Java - Size: 7.31 MB - Last synced at: 4 months ago - Pushed at: 12 months ago - Stars: 137 - Forks: 17
davebraze/FDBeye
R tools for eyetracker workflows.
Language: R - Size: 5.42 MB - Last synced at: 4 months ago - Pushed at: over 3 years ago - Stars: 119 - Forks: 14
MicheleCotrufo/pdf2doi
A python library/command-line tool to extract the DOI or other identifiers of a scientific paper from a pdf file.
Language: Python - Size: 79.7 MB - Last synced at: 4 months ago - Pushed at: 7 months ago - Stars: 114 - Forks: 22
ropensci-archive/rorcid ๐ฆ
:warning: ARCHIVED :warning: A programmatic interface the Orcid.org API
Language: R - Size: 3.79 MB - Last synced at: 6 days ago - Pushed at: over 1 year ago - Stars: 109 - Forks: 15
shapr/fermatslastmargin
tool for creating and sharing annotations, using github for storage and social network
Language: Haskell - Size: 1.33 MB - Last synced at: 4 days ago - Pushed at: over 3 years ago - Stars: 90 - Forks: 9
Beomi/cite.gg
๐ ์ฐ๋ฆฌ๊ฐ ์ฝ์ ๋ ผ๋ฌธ์ ์ฐพ์์, Cite.GG
Language: Vue - Size: 3.87 MB - Last synced at: 3 months ago - Pushed at: about 1 year ago - Stars: 89 - Forks: 4
MicheleCotrufo/pdf2bib
A python library/command-line tool to quickly and automatically generate BibTeX data starting from the pdf file of a scientific publication.
Language: Python - Size: 21.9 MB - Last synced at: 21 days ago - Pushed at: about 1 year ago - Stars: 79 - Forks: 8
mrossinek/cobib
Console Bibliography
Language: Python - Size: 3.27 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 66 - Forks: 3
greenelab/crossref
Download metadata for all DOIs using the Crossref API
Language: Jupyter Notebook - Size: 54.7 KB - Last synced at: 4 months ago - Pushed at: almost 7 years ago - Stars: 66 - Forks: 10
mseri/doi2bib
Smalls CLIs to get a bibtex entries from a DOI, an arXiv ID or a PubMed ID and to pretty print bibtex entries (or files)
Language: OCaml - Size: 334 KB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 61 - Forks: 7
eblondel/zen4R
zen4R - R Interface to Zenodo REST API
Language: R - Size: 2.82 MB - Last synced at: 27 days ago - Pushed at: 27 days ago - Stars: 50 - Forks: 15
dsfsi/covid19africa
Africa open COVID-19 data working group
Language: Jupyter Notebook - Size: 27.7 MB - Last synced at: 5 days ago - Pushed at: over 4 years ago - Stars: 47 - Forks: 55
NCEAS/metacatui
MetacatUI: A client-side web interface for DataONE data repositories
Language: JavaScript - Size: 350 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 45 - Forks: 27
rougier/persid
Persistent identifier library for GNU Emacs
Language: Emacs Lisp - Size: 87.9 KB - Last synced at: 10 days ago - Pushed at: 6 months ago - Stars: 39 - Forks: 3
AASJournals/Tutorials
Tutorials for creating figures, tables, or other content for AAS Journals.
Language: HTML - Size: 42.2 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 39 - Forks: 61
ropensci/handlr
convert among citation formats
Language: R - Size: 204 KB - Last synced at: 22 days ago - Pushed at: 6 months ago - Stars: 38 - Forks: 4
vandroogenbroeckmarc/doi2bib
Tool to convert a DOI to a BiBTeX entry (mainly "adapted" for the computer vision and machine learning communities)
Language: TeX - Size: 833 KB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 33 - Forks: 2
sckott/serrano
Low level Ruby client for Crossref
Language: Ruby - Size: 2.43 MB - Last synced at: 6 days ago - Pushed at: 3 months ago - Stars: 32 - Forks: 3
regexhq/doi-regex
Regular expression for matching DOIs
Language: HTML - Size: 349 KB - Last synced at: 2 days ago - Pushed at: about 1 year ago - Stars: 31 - Forks: 5
mdmower/doi-resolver
A browser extension to resolve and work with DOIs
Language: TypeScript - Size: 4.63 MB - Last synced at: 9 days ago - Pushed at: 21 days ago - Stars: 30 - Forks: 4
content-optimizer-gmbh/mautic-doi-plugin
A robust and flexible way to add double-opt-in (DOI) to any form in Mautic
Language: PHP - Size: 121 KB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 28 - Forks: 4
SciCatProject/frontend
SciCat Project Official Frontend
Language: TypeScript - Size: 46.9 MB - Last synced at: 1 day ago - Pushed at: 2 days ago - Stars: 27 - Forks: 34
sgrieve/ScholarDOI
A Chrome extension which adds DOI support to Google Scholar
Language: JavaScript - Size: 138 KB - Last synced at: over 1 year ago - Pushed at: over 5 years ago - Stars: 27 - Forks: 4
ropensci/rdryad
R client for Dryad web services
Language: R - Size: 587 KB - Last synced at: 24 days ago - Pushed at: over 2 years ago - Stars: 26 - Forks: 7
StuntsPT/Structure_threader
A wrapper program to parallelize and automate runs of "Structure", "fastStructure" and "MavericK".
Language: Python - Size: 50.6 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 25 - Forks: 9
zeitlings/ubib
Citations, BibTeX, and Research
Size: 6.82 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 24 - Forks: 0
bibcure/title2bib
Given a title returns the bibtex
Language: Python - Size: 42 KB - Last synced at: 2 months ago - Pushed at: about 5 years ago - Stars: 21 - Forks: 4
greenelab/opencitations
Processing OpenCitations Data
Language: Jupyter Notebook - Size: 20.5 KB - Last synced at: 4 months ago - Pushed at: about 8 years ago - Stars: 20 - Forks: 0
mattsse/crossref-rs
A rust client for the Crossref-API
Language: Rust - Size: 116 KB - Last synced at: 24 days ago - Pushed at: over 1 year ago - Stars: 19 - Forks: 6
aMarcireau/origami
An application to visualize scholar articles as an interactive graph
Language: JavaScript - Size: 7.83 MB - Last synced at: 5 months ago - Pushed at: over 2 years ago - Stars: 19 - Forks: 1
wpoa/OA-signalling
A project to coordinate implementing a system to signal whether references cited on Wikipedia are free to reuse
Language: Jupyter Notebook - Size: 80.8 MB - Last synced at: 5 days ago - Pushed at: over 8 years ago - Stars: 19 - Forks: 4
front-matter/commonmeta-py
Documentation
Language: Python - Size: 70.6 MB - Last synced at: 2 days ago - Pushed at: 4 days ago - Stars: 17 - Forks: 6
BEXIS2/Core
This is the public code repository of the BEXIS2 data management software. It contains only modules, components, and packages of the core system. Contributed modules and components will be available in separate repositories. For more information on BEXIS2, please visit our website.
Language: JavaScript - Size: 258 MB - Last synced at: 9 days ago - Pushed at: 9 days ago - Stars: 17 - Forks: 15
basnijholt/yaml2bib
๐ Convert a yaml file to bib file with the correct journal abbreviations.
Language: Python - Size: 112 KB - Last synced at: 42 minutes ago - Pushed at: 3 days ago - Stars: 15 - Forks: 1
spirosbax/to-sci-hub
Search for a DOI (Digital Object Identifier) in Sci-Hub immediately after selecting it
Language: JavaScript - Size: 11.7 KB - Last synced at: 5 months ago - Pushed at: over 6 years ago - Stars: 15 - Forks: 1
datacite/lupo
DataCite REST API
Language: Ruby - Size: 16 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 14 - Forks: 8
datacite/bracco
Frontend for the DataCite DOI Fabrica service
Language: JavaScript - Size: 39.7 MB - Last synced at: 1 day ago - Pushed at: about 1 month ago - Stars: 14 - Forks: 8
nelsoncardenas/MDPI-Alternative-Style-for-Zotero-Mendeley
Actual csl file for MDPI reference in Zotero repository doesn't use DOI. This is an alternative .csl archive for MDPI format with DOI detection.
Size: 49.8 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 14 - Forks: 8
abd3lraouf/Semantic
android + Kotlin + Semantic releases + SpotBugs + Jacoco + maven + Gradle + groovy + GitHub actions + SonarQube + commitlint
Language: Kotlin - Size: 723 KB - Last synced at: 2 days ago - Pushed at: over 2 years ago - Stars: 12 - Forks: 0
ropensci/citecorp
Client for the Open Citations Corpus
Language: R - Size: 120 KB - Last synced at: 2 days ago - Pushed at: 7 months ago - Stars: 11 - Forks: 4
mttmantovani/zotero-arxiv-doi-retriever
Look for arXiv papers in a Zotero library and find available DOIs of published versions.
Language: Jupyter Notebook - Size: 21.5 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 11 - Forks: 3
Coleridge-Initiative/RCApi
Rich Context API integrations for federating metadata discovery and exchange across multiple scholarly infrastructure providers
Language: Python - Size: 7.17 MB - Last synced at: 19 days ago - Pushed at: over 4 years ago - Stars: 11 - Forks: 3
hboisgibault/unicontent
Python module to extract structured metadata from URL, ISBN or DOI
Language: Python - Size: 34.2 KB - Last synced at: about 2 months ago - Pushed at: about 7 years ago - Stars: 11 - Forks: 1
hscells/doi
Parse and check doi objects in go.
Language: Go - Size: 3.91 KB - Last synced at: 5 months ago - Pushed at: about 8 years ago - Stars: 11 - Forks: 2
alan-turing-institute/academic_review_tool
The Academic Review Tool (ART) is a package for performing academic reviews and bibliometric analyses in Python. It offers capabilities for discovering, retrieving, and analysing academic literature at scale.
Language: Python - Size: 22 MB - Last synced at: 3 days ago - Pushed at: 9 months ago - Stars: 10 - Forks: 0
carmanzhang/LAGOS-AND
LAGOS-AND: A Large Gold Standard Dataset for Scholarly Author Name Disambiguation
Language: Python - Size: 229 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 10 - Forks: 1
NeotomaDB/MetaExtractor
A repository for the UBC MDS Capstone team to develop a metadata extractor for Neotoma
Language: Jupyter Notebook - Size: 51.8 MB - Last synced at: 2 days ago - Pushed at: 5 months ago - Stars: 9 - Forks: 3
vsoch/citelang
markdown syntax and credit system for software!
Language: Python - Size: 7.14 MB - Last synced at: 3 days ago - Pushed at: 8 months ago - Stars: 9 - Forks: 3
sckott/parseids
Parse identifiers (e.g., DOIs)
Language: C++ - Size: 160 KB - Last synced at: 6 days ago - Pushed at: 11 months ago - Stars: 9 - Forks: 0
tdegeus/GooseBib
Some simple command-line tools to clean-up / modify BibTeX files
Language: Python - Size: 402 KB - Last synced at: 18 days ago - Pushed at: over 1 year ago - Stars: 9 - Forks: 3
wpoa/recitation-bot
MediaWiki bot to upload content to Wikimedia projects and update corresponding citations on Wikipedia.
Language: Python - Size: 149 KB - Last synced at: 5 days ago - Pushed at: over 4 years ago - Stars: 9 - Forks: 3
panwanke/txt2doi
Reference (bibliography) text to dois
Language: JavaScript - Size: 4.29 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 8 - Forks: 0
PubPeerFoundation/PublicationDataExtractor
Extract Research Publication data from any external API into a simple common structure
Language: PHP - Size: 285 KB - Last synced at: about 2 months ago - Pushed at: 9 months ago - Stars: 8 - Forks: 1
papis/python-doi Fork of alejandrogallo/python-doi
Python library to work with Document Object Identifiers (doi)
Language: Makefile - Size: 258 KB - Last synced at: 22 days ago - Pushed at: over 1 year ago - Stars: 8 - Forks: 3
bdcaf/calibre-crossref-doi-download
Metadata download plugin for calibre. Downloads bibliographic metadata through the Crossref REST API
Language: Python - Size: 80.1 KB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 8 - Forks: 0
citation-js/plugin-quickstatements
Citation.js plugin to output QuickStatements
Language: JavaScript - Size: 87.9 KB - Last synced at: about 1 month ago - Pushed at: 4 months ago - Stars: 7 - Forks: 2
sckott/extcite
pull dois out of pdfs > content negotation > bib file
Language: Ruby - Size: 1.46 MB - Last synced at: 6 days ago - Pushed at: about 2 years ago - Stars: 7 - Forks: 0
otvam/IEEEtran_file_url_doi_link_bibtex
IEEEtran.bst BibTeX Style with File, DOI, and URL Links
Language: TeX - Size: 232 KB - Last synced at: 6 months ago - Pushed at: almost 4 years ago - Stars: 7 - Forks: 2
WolfgangFahl/pysotsog
python Library for Scholars to achieve "Standing on the shoulders of giants"
Language: Python - Size: 897 KB - Last synced at: 11 days ago - Pushed at: 3 months ago - Stars: 6 - Forks: 0
AlbertoCuadra/doi_scraper
Digital Object Identifier scraper written in Python
Language: Python - Size: 34.2 KB - Last synced at: 1 day ago - Pushed at: 4 months ago - Stars: 6 - Forks: 0
foucault/citation
Generate bibtex entries from Document Object Identifiers (DOI)
Language: Python - Size: 6.84 KB - Last synced at: 1 day ago - Pushed at: about 1 year ago - Stars: 6 - Forks: 3
coderefinery/github-without-command-line
Collaborating and sharing using GitHub without command line.
Language: Python - Size: 11.5 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 11
edamontology/pubfetcher
A Java command-line tool and library to download and store publications with metadata by combining content from various online resources
Language: Java - Size: 568 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 6 - Forks: 1
sckott/pubpatterns
Lookup for full text urls
Language: Ruby - Size: 85 KB - Last synced at: 6 days ago - Pushed at: almost 5 years ago - Stars: 6 - Forks: 5
sckott/pubpatternsapi ๐ฆ
PubPatterns REST API (DEFUNCT)
Language: Ruby - Size: 109 KB - Last synced at: 6 days ago - Pushed at: almost 5 years ago - Stars: 6 - Forks: 0
alejandrogallo/python-doi
Python library to work with Document Object Identifiers (doi)
Language: Makefile - Size: 245 KB - Last synced at: 3 months ago - Pushed at: over 6 years ago - Stars: 6 - Forks: 5
greenelab/library-access
Collecting data on whether library access to scholarly literature
Language: Jupyter Notebook - Size: 52.7 KB - Last synced at: 16 days ago - Pushed at: over 7 years ago - Stars: 6 - Forks: 3
Daniel-KM/Omeka-S-module-Bibliography
Module for Omeka S that adds a view helper to display Displays a standard citation for items and bibliographic resources.
Language: PHP - Size: 418 KB - Last synced at: 4 months ago - Pushed at: 7 months ago - Stars: 5 - Forks: 1
lazappi/doilinker
Link Preprints And Publications By DOI
Language: R - Size: 137 KB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 5 - Forks: 0
Guillawme/zotero-doi-link-quickcopy
"Copy Selected Items' DOIs to Clipboard" shortcut for Zotero
Language: JavaScript - Size: 5.86 KB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 5 - Forks: 2
gederajeg/figshare-doi-badge
testing badge inclusion in readme
Size: 194 KB - Last synced at: 2 months ago - Pushed at: over 6 years ago - Stars: 5 - Forks: 18
peterwittek/bibpain
Bibtex Painkiller
Language: Python - Size: 7.81 KB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 5 - Forks: 2
pritampanda15/PandaCite
A Python-based citation manager
Language: Python - Size: 412 KB - Last synced at: about 20 hours ago - Pushed at: 4 months ago - Stars: 4 - Forks: 1
maxkratz/ieeetran_doi
Some modifications to include DOIs (Digital Object Identifiers) into the IEEE tran BibTeX style.
Language: TeX - Size: 58.6 KB - Last synced at: 3 months ago - Pushed at: 10 months ago - Stars: 4 - Forks: 1
dpriskorn/WikidataOrcidScraper
This tool helps scrape DOIs from https://orcid.org/ and curate them using Scholia
Language: Python - Size: 274 KB - Last synced at: 2 days ago - Pushed at: about 1 year ago - Stars: 4 - Forks: 0
CNES/DOI-server
Data object identifier server
Language: Java - Size: 58.3 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 4 - Forks: 4
wirhabenzeit/pybibget
Command line utility to automatically retrieve BibTeX citations from MathSciNet, arXiv, PubMed and doi.org
Language: Python - Size: 728 KB - Last synced at: about 1 month ago - Pushed at: over 2 years ago - Stars: 4 - Forks: 0
hirmeos/identifier_translation_service ๐ฆ
HIRMEOS WP6's common service allowing conversion from/to standarised URIs.
Language: Python - Size: 132 KB - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 4 - Forks: 2
CABAH/assignDOI
Assign a digital object identifier (DOI) to your Github repository
Size: 275 KB - Last synced at: over 2 years ago - Pushed at: almost 4 years ago - Stars: 4 - Forks: 2
