An open API service providing repository metadata for many open source software ecosystems.

Topic: "science"

JuliaLang/julia

The Julia Programming Language

Language: Julia - Size: 314 MB - Last synced at: 5 days ago - Pushed at: 5 days ago - Stars: 46,816 - Forks: 5,580

academic/awesome-datascience

:memo: An awesome Data Science repository to learn and apply for real world problems.

Size: 1.5 MB - Last synced at: 8 days ago - Pushed at: about 2 months ago - Stars: 26,106 - Forks: 6,040

mahmoud/awesome-python-applications

πŸ’Ώ Free software that works great, and also happens to be open-source Python.

Language: Jupyter Notebook - Size: 4.14 MB - Last synced at: 4 days ago - Pushed at: 5 months ago - Stars: 17,074 - Forks: 2,707

sympy/sympy

A computer algebra system written in pure Python

Language: Python - Size: 180 MB - Last synced at: 5 days ago - Pushed at: 6 days ago - Stars: 13,542 - Forks: 4,666

Stellarium/stellarium

Stellarium is a free GPL software which renders realistic skies in real time with OpenGL. It is available for Linux/Unix, Windows and macOS. With Stellarium, you really see what you can see with your eyes, binoculars or a small telescope.

Language: C++ - Size: 4.89 GB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 8,561 - Forks: 889

modelscope/modelscope

ModelScope: bring the notion of Model-as-a-Service to life.

Language: Python - Size: 53.7 MB - Last synced at: 1 day ago - Pushed at: 6 days ago - Stars: 7,725 - Forks: 797

Future-House/paper-qa

High accuracy RAG for answering questions from scientific documents with citations

Language: Python - Size: 14.9 MB - Last synced at: about 5 hours ago - Pushed at: 4 days ago - Stars: 7,186 - Forks: 706

dformoso/machine-learning-mindmap

A mindmap summarising Machine Learning concepts, from Data Analysis to Deep Learning.

Size: 14.8 MB - Last synced at: 9 days ago - Pushed at: almost 5 years ago - Stars: 6,179 - Forks: 1,007

stdlib-js/stdlib

✨ Standard library for JavaScript and Node.js. ✨

Language: JavaScript - Size: 1.93 GB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 5,089 - Forks: 805

astropy/astropy

Astronomy and astrophysics core library

Language: Python - Size: 165 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 4,645 - Forks: 1,853

plotters-rs/plotters

A rust drawing library for high quality data plotting for both WASM and native, statically and realtimely πŸ¦€ πŸ“ˆπŸš€

Language: Rust - Size: 7.48 MB - Last synced at: 1 day ago - Pushed at: 24 days ago - Stars: 4,154 - Forks: 301

google/deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Language: Python - Size: 786 MB - Last synced at: 11 days ago - Pushed at: about 1 month ago - Stars: 3,365 - Forks: 742

amilajack/reading

A list of computer-science readings I recommend

Size: 523 MB - Last synced at: 15 days ago - Pushed at: over 2 years ago - Stars: 3,310 - Forks: 728

sbrugman/deep-learning-papers πŸ“¦

Papers about deep learning ordered by task, date. Current state-of-the-art papers are labelled.

Size: 61.8 MB - Last synced at: 3 months ago - Pushed at: over 5 years ago - Stars: 3,192 - Forks: 412

Revolutionary-Games/Thrive

The main repository for the development of the evolution game Thrive.

Language: C# - Size: 155 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 3,109 - Forks: 529

apptainer/singularity

Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.

Language: Go - Size: 34.8 MB - Last synced at: 7 days ago - Pushed at: over 2 years ago - Stars: 2,560 - Forks: 427

hgrecco/pint

Operate and manipulate physical quantities in Python

Language: Python - Size: 4.65 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 2,535 - Forks: 480

BOINC/boinc

Open-source software for volunteer computing and grid computing.

Language: PHP - Size: 270 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 2,115 - Forks: 472

sagemath/sage-archive-2023-02-01 πŸ“¦

This repository used to be the user-facing mirror of the Sage source tree. As Sage development migrated on 2023-02-01 from https://trac.sagemath.org/ to our new repository on GitHub, https://github.com/sagemath/sage, we have renamed and archived this repository.

Language: Python - Size: 310 MB - Last synced at: 2 days ago - Pushed at: about 2 years ago - Stars: 2,006 - Forks: 407

GoldenCheetah/GoldenCheetah

Performance Software for Cyclists, Runners, Triathletes and Coaches

Language: Standard ML - Size: 253 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 1,907 - Forks: 454

broadinstitute/gatk

Official code repository for GATK versions 4 and up

Language: Java - Size: 464 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 1,793 - Forks: 604

psychopy/psychopy

For running psychology and neuroscience experiments

Language: Python - Size: 281 MB - Last synced at: 9 days ago - Pushed at: 10 days ago - Stars: 1,774 - Forks: 936

deepcharles/ruptures

ruptures: change point detection in Python

Language: Python - Size: 10.9 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 1,767 - Forks: 167

bobeff/programming-math-science

This is a list of links to different freely available learning resources about computer programming, math, and science.

Size: 1.21 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 1,754 - Forks: 122

Future-Scholars/paperlib

An open-source academic paper management tool.

Language: TypeScript - Size: 75.1 MB - Last synced at: about 14 hours ago - Pushed at: about 15 hours ago - Stars: 1,720 - Forks: 73

dformoso/deeplearning-mindmap

A mindmap summarising Deep Learning concepts.

Size: 14 MB - Last synced at: 12 days ago - Pushed at: almost 6 years ago - Stars: 1,673 - Forks: 358

MartinThoma/LaTeX-examples

Examples for the usage of LaTeX

Language: TeX - Size: 291 MB - Last synced at: 10 days ago - Pushed at: 6 months ago - Stars: 1,633 - Forks: 413

arxiv-vanity/arxiv-vanity

Renders papers from arXiv as responsive web pages so you don't have to squint at a PDF.

Language: Python - Size: 2.13 MB - Last synced at: 13 days ago - Pushed at: almost 2 years ago - Stars: 1,619 - Forks: 98

materialsproject/pymatgen

Python Materials Genomics (pymatgen) is a robust materials analysis code that defines classes for structures and molecules with support for many electronic structure codes. It powers the Materials Project.

Language: Python - Size: 1.02 GB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 1,614 - Forks: 895

stared/science-based-games-list

Science-based games - a collaborative list

Size: 216 KB - Last synced at: 27 days ago - Pushed at: 10 months ago - Stars: 1,604 - Forks: 117

galaxyproject/galaxy

Data intensive science for everyone.

Language: Python - Size: 651 MB - Last synced at: 4 days ago - Pushed at: 4 days ago - Stars: 1,481 - Forks: 1,037

common-workflow-language/common-workflow-language

Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊

Language: Common Workflow Language - Size: 3.63 MB - Last synced at: 7 days ago - Pushed at: 5 months ago - Stars: 1,463 - Forks: 195

duerrsimon/bioicons

A library of free open source icons for science illustrations in biology and chemistry

Language: Vue - Size: 574 MB - Last synced at: about 13 hours ago - Pushed at: 2 days ago - Stars: 1,450 - Forks: 82

MDAnalysis/mdanalysis

MDAnalysis is a Python library to analyze molecular dynamics simulations.

Language: Python - Size: 505 MB - Last synced at: 8 days ago - Pushed at: 12 days ago - Stars: 1,408 - Forks: 706

neherlab/covid19_scenarios

Models of COVID-19 outbreak trajectories and hospital demand

Language: JavaScript - Size: 56.5 MB - Last synced at: 13 days ago - Pushed at: about 3 years ago - Stars: 1,355 - Forks: 350

apptainer/apptainer

Apptainer: Application containers for Linux

Language: Go - Size: 39.8 MB - Last synced at: 2 days ago - Pushed at: 3 days ago - Stars: 1,282 - Forks: 148

glumpy/glumpy

Python+Numpy+OpenGL: fast, scalable and beautiful scientific visualization

Language: Python - Size: 11.8 MB - Last synced at: 7 days ago - Pushed at: over 1 year ago - Stars: 1,258 - Forks: 177

obspy/obspy

ObsPy: A Python Toolbox for seismology/seismological observatories.

Language: Python - Size: 102 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 1,214 - Forks: 541

inukshuk/anystyle

Fast citation reference parsing

Language: Ruby - Size: 17.3 MB - Last synced at: 13 days ago - Pushed at: 8 months ago - Stars: 1,099 - Forks: 93

jspsych/jsPsych

Create behavioral experiments in a browser using JavaScript

Language: TypeScript - Size: 45.1 MB - Last synced at: 6 days ago - Pushed at: 8 days ago - Stars: 1,088 - Forks: 695

arxiv-vanity/engrafo

Convert LaTeX documents into beautiful responsive web pages using LaTeXML.

Language: HTML - Size: 21.6 MB - Last synced at: 12 days ago - Pushed at: over 1 year ago - Stars: 1,088 - Forks: 89

brian-team/brian2

Brian is a free, open source simulator for spiking neural networks.

Language: Python - Size: 35.9 MB - Last synced at: 7 days ago - Pushed at: 9 days ago - Stars: 996 - Forks: 237

Jieyab89/OSINT-Cheat-sheet

OSINT cheat sheet, list OSINT tools, wiki, dataset, article, book , red team OSINT for hackers and OSINT tips and OSINT branch. This repository will grow every time will research, there is a research, science and technology, tutorial. Please use it wisely.

Language: HTML - Size: 22.3 MB - Last synced at: about 9 hours ago - Pushed at: about 9 hours ago - Stars: 945 - Forks: 142

poliastro/poliastro πŸ“¦

poliastro - :rocket: Astrodynamics in Python

Language: Python - Size: 43.7 MB - Last synced at: 1 day ago - Pushed at: over 1 year ago - Stars: 920 - Forks: 288

OSGeo/grass

GRASS - free and open-source geospatial processing engine

Language: C - Size: 339 MB - Last synced at: about 6 hours ago - Pushed at: about 6 hours ago - Stars: 909 - Forks: 352

sachin-source/top-github-repositories-which-everyone-should-look

This repository contains a list of important and useful github repos which a developer, coder, a student should never miss to look at.

Size: 146 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 899 - Forks: 101

code-dot-org/code-dot-org

The code powering code.org and studio.code.org

Language: JavaScript - Size: 2.02 GB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 861 - Forks: 496

JuliaDynamics/DrWatson.jl

The perfect sidekick to your scientific inquiries

Language: Julia - Size: 2.41 MB - Last synced at: 6 days ago - Pushed at: 5 months ago - Stars: 855 - Forks: 91

opensim-org/opensim-core

SimTK OpenSim C++ libraries and command-line applications, and Java/Python wrapping.

Language: C++ - Size: 209 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 850 - Forks: 331

OpenSpace/OpenSpace

This is the official GitHub repository for OpenSpace: an open source astrovisualization project. For instructions on how to build and run OpenSpace, see the Getting Started Guides on the wiki page at http://docs.openspaceproject.com.

Language: C++ - Size: 472 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 847 - Forks: 135

umutphp/hacker-laws-tr Fork of dwmkerr/hacker-laws

πŸ’»πŸ“– ProgramcΔ±larΔ±n faydalΔ± bulacağı yasalar, teoriler, prensipler ve desenler. #hackerlaws

Size: 2.76 MB - Last synced at: about 2 months ago - Pushed at: about 2 months ago - Stars: 846 - Forks: 56

modenaxe/awesome-biomechanics

A curated, public list of resources for biomechanics and human motion analysis: datasets, processing tools, software for simulation, educational videos, lectures, etc.

Size: 689 KB - Last synced at: 3 days ago - Pushed at: 13 days ago - Stars: 827 - Forks: 136

cBioPortal/cbioportal

cBioPortal for Cancer Genomics

Language: Java - Size: 342 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 767 - Forks: 653

Scifabric/pybossa

PYBOSSA is the ultimate crowdsourcing framework (aka microtasking) to analyze or enrich data that can't be processed by machines alone.

Language: Python - Size: 13.3 MB - Last synced at: about 1 year ago - Pushed at: about 2 years ago - Stars: 734 - Forks: 265

danforthcenter/plantcv

Plant phenotyping with image analysis

Language: Python - Size: 487 MB - Last synced at: 3 days ago - Pushed at: 15 days ago - Stars: 701 - Forks: 269

dformoso/sklearn-classification

Data Science Notebook on a Classification Task, using sklearn and Tensorflow.

Language: Jupyter Notebook - Size: 10.8 MB - Last synced at: 17 days ago - Pushed at: over 3 years ago - Stars: 690 - Forks: 233

CenterForOpenScience/osf.io

Facilitating Open Science

Language: Python - Size: 201 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 688 - Forks: 343

openml/OpenML

Open Machine Learning

Language: PHP - Size: 592 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 686 - Forks: 97

pygfx/pygfx

Powerful and versatile visualization for Python.

Language: Python - Size: 42.3 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 662 - Forks: 49

pymeasure/pymeasure

Scientific measurement library for instruments, experiments, and live-plotting

Language: Python - Size: 9.05 MB - Last synced at: 3 days ago - Pushed at: 4 days ago - Stars: 655 - Forks: 391

ArsMasiuk/qvge

Qt Visual Graph Editor

Language: C++ - Size: 17.2 MB - Last synced at: 18 days ago - Pushed at: about 1 year ago - Stars: 622 - Forks: 126

sciencefair-land/sciencefair

The futuristic, fabulous and free desktop app for working with scientific literature :microscope: :book:

Language: JavaScript - Size: 51.8 MB - Last synced at: 11 days ago - Pushed at: almost 5 years ago - Stars: 607 - Forks: 52

PlasmaPy/PlasmaPy

An open source Python package for plasma research and education

Language: Python - Size: 32.5 MB - Last synced at: 9 days ago - Pushed at: 13 days ago - Stars: 596 - Forks: 345

GeoStat-Framework/GSTools

GSTools - A geostatistical toolbox: random fields, variogram estimation, covariance models, kriging and much more

Language: Python - Size: 17.6 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 592 - Forks: 75

Developer-Y/math-science-video-lectures

List of Science courses with video lectures

Size: 59.6 KB - Last synced at: 23 days ago - Pushed at: 23 days ago - Stars: 586 - Forks: 131

jts/nanopolish

Signal-level algorithms for MinION data

Language: C++ - Size: 58.2 MB - Last synced at: 3 months ago - Pushed at: over 1 year ago - Stars: 577 - Forks: 159

kr-stn/awesome-sentinel

curated list of awesome tools, tutorials and APIs for Copernicus Sentinel satellite data

Size: 155 KB - Last synced at: 3 days ago - Pushed at: about 2 months ago - Stars: 558 - Forks: 67

googlearchive/science-journal-ios πŸ“¦

Use the sensors in your mobile devices to perform science experiments. Science doesn’t just happen in the classroom or labβ€”tools like Science Journal let you see how the world works with just your phone.

Language: Swift - Size: 20.3 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 535 - Forks: 66

codalab/codalab-competitions

CodaLab Competitions

Language: Python - Size: 71.7 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 517 - Forks: 130

lindenb/jvarkit

Java utilities for Bioinformatics

Language: Java - Size: 59.6 MB - Last synced at: about 12 hours ago - Pushed at: about 12 hours ago - Stars: 497 - Forks: 133

pandoc-scholar/pandoc-scholar

Create beautiful and semantically meaningful articles with pandoc.

Language: Lua - Size: 787 KB - Last synced at: about 1 month ago - Pushed at: about 2 years ago - Stars: 483 - Forks: 50

yaoguangluo/Deta_Parser

εΏ«ι€ŸδΈ­ζ–‡εˆ†θ―εˆ†ζžword segmentation

Language: Java - Size: 7.42 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 477 - Forks: 88

reymond-group/smilesDrawer

A small, highly performant JavaScript component for parsing and drawing SMILES strings. Released under the MIT license.

Language: JavaScript - Size: 17.6 MB - Last synced at: 23 days ago - Pushed at: 23 days ago - Stars: 472 - Forks: 74

massimoaria/bibliometrix

An R-tool for comprehensive science mapping analysis. A package for quantitative research in scientometrics and bibliometrics.

Language: R - Size: 110 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 469 - Forks: 143

R-js/libRmath.js

Javascript Pure Implementation of Statistical R "core" numerical libRmath.so

Language: TypeScript - Size: 5.72 MB - Last synced at: 13 days ago - Pushed at: 12 months ago - Stars: 468 - Forks: 32

m-labs/artiq

A leading-edge control system for quantum information experiments

Language: Python - Size: 17.2 MB - Last synced at: 7 days ago - Pushed at: 8 days ago - Stars: 462 - Forks: 201

merenlab/anvio

An analysis and visualization platform for 'omics data

Language: Python - Size: 745 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 460 - Forks: 146

helenahartmann/awesome-PhD

All the resources I wish I knew when starting my PhD. This repository is aimed to be a living, constantly developing resource where everybody can contribute with new resources!

Size: 86.9 KB - Last synced at: 11 days ago - Pushed at: 4 months ago - Stars: 456 - Forks: 25

Opentrons/opentrons

Software for writing protocols and running them on the Opentrons Flex and Opentrons OT-2

Language: Python - Size: 429 MB - Last synced at: about 22 hours ago - Pushed at: about 23 hours ago - Stars: 446 - Forks: 182

reilleya/openMotor

An open-source internal ballistics simulator for rocket motor experimenters

Language: Python - Size: 645 KB - Last synced at: 13 days ago - Pushed at: 14 days ago - Stars: 434 - Forks: 90

recipy/recipy

Effortless method to record provenance in Python

Language: Python - Size: 1.1 MB - Last synced at: 7 days ago - Pushed at: over 3 years ago - Stars: 434 - Forks: 42

mkhan45/CalcuLaTeX

A pretty printing calculator language with support for units. Makes calculations easier and more presentable with real time LaTeX output, along with support for units, variables, and mathematical functions.

Language: Rust - Size: 1010 KB - Last synced at: 17 days ago - Pushed at: over 3 years ago - Stars: 399 - Forks: 17

evrimagaci/periodum

Periodum: An Interactive, Open-Source Periodic Table!

Language: Vue - Size: 9.14 MB - Last synced at: 1 day ago - Pushed at: almost 2 years ago - Stars: 397 - Forks: 67

twbattaglia/RNAseq-workflow

A repository for setting up a RNAseq workflow

Language: R - Size: 3.67 MB - Last synced at: about 1 year ago - Pushed at: about 8 years ago - Stars: 381 - Forks: 176

raivivek/awesome-biology

Curated (meta)list of resources for Biology.

Size: 190 KB - Last synced at: 11 days ago - Pushed at: over 1 year ago - Stars: 369 - Forks: 47

macoj/phd

A list of resources on how/why to do a PhD

Size: 43 KB - Last synced at: 2 days ago - Pushed at: over 5 years ago - Stars: 358 - Forks: 52

common-workflow-language/cwltool

Common Workflow Language reference implementation

Language: Python - Size: 11.3 MB - Last synced at: about 15 hours ago - Pushed at: 12 days ago - Stars: 347 - Forks: 231

ReproNim/neurodocker

Generate custom Docker and Singularity images, and minimize existing containers

Language: Python - Size: 8.35 MB - Last synced at: 9 days ago - Pushed at: 19 days ago - Stars: 337 - Forks: 97

bcgsc/abyss

:microscope: Assemble large genomes using short reads

Language: C++ - Size: 60.9 MB - Last synced at: 13 days ago - Pushed at: 24 days ago - Stars: 317 - Forks: 110

VIDA-NYU/reprozip

ReproZip is a tool that simplifies the process of creating reproducible experiments from command-line executions, a frequently-used common denominator in computational science.

Language: Python - Size: 19.8 MB - Last synced at: 6 days ago - Pushed at: 5 months ago - Stars: 314 - Forks: 35

astropy/astropy-tutorials

Tutorials for the Astropy Project

Language: Jupyter Notebook - Size: 26.4 MB - Last synced at: 4 days ago - Pushed at: 20 days ago - Stars: 312 - Forks: 183

brewsci/homebrew-bio

:beer::microscope: Bioinformatics formulae for the Homebrew package manager (macOS and Linux)

Language: Ruby - Size: 3.63 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 310 - Forks: 119

codemeta/codemeta

Minimal metadata schemas for science software and code, in JSON-LD

Language: Python - Size: 9.99 MB - Last synced at: 10 days ago - Pushed at: 13 days ago - Stars: 308 - Forks: 88

favreau/Sol-R Fork of cyrillefavreau/Sol-R

Open-Source CUDA/OpenCL Speed Of Light Ray-tracer

Language: C++ - Size: 22 MB - Last synced at: 5 months ago - Pushed at: 10 months ago - Stars: 306 - Forks: 14

seisbench/seisbench

SeisBench - A toolbox for machine learning in seismology

Language: Jupyter Notebook - Size: 41.3 MB - Last synced at: 10 days ago - Pushed at: 10 days ago - Stars: 305 - Forks: 95

PrejudiceNeutrino/YouTube_Channels

A comprehensive list of YouTube channels and other resources.

Size: 379 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 304 - Forks: 30

pyzo/pyzo

Python to the people

Language: Python - Size: 10.2 MB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 300 - Forks: 75

rougier/ten-rules

Ten simple rules for better figures

Language: Python - Size: 693 KB - Last synced at: about 17 hours ago - Pushed at: almost 2 years ago - Stars: 294 - Forks: 71

lupantech/MathVista

MathVista: data, code, and evaluation for Mathematical Reasoning in Visual Contexts

Language: Jupyter Notebook - Size: 50.2 MB - Last synced at: 9 days ago - Pushed at: 5 months ago - Stars: 292 - Forks: 48

glotzerlab/freud

Powerful, efficient particle trajectory analysis in scientific Python.

Language: C++ - Size: 82.2 MB - Last synced at: 7 days ago - Pushed at: 10 days ago - Stars: 290 - Forks: 51