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Topic: "free-energy-surface"

sbhakat/Plotting-MD-Metadynamics

Jupyter Notebook showing how to plot FES, histograms and time-series data using Matplotlib.

Language: Jupyter Notebook - Size: 1.1 MB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 8 - Forks: 2

charlesdavid/JEDi

JEDi: Java Essential Dynamics Inspector

Language: Java - Size: 80.2 MB - Last synced at: about 1 year ago - Pushed at: over 3 years ago - Stars: 5 - Forks: 0

SalapakaLab-SIMBioSys/Non-Equilibrium-Toolbox

Toolkit for quantifying errors in non-equilibrium data

Language: Python - Size: 6.35 MB - Last synced at: about 2 months ago - Pushed at: almost 3 years ago - Stars: 2 - Forks: 0

danieljsharpe/metadynamics

C++ implementation of metadynamics simulation on a potential energy surface

Language: C++ - Size: 69.3 KB - Last synced at: about 2 years ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0