computational-science | Topic | Ecosyste.ms: Repos

Topic: "computational-science"

weijie-chen/Linear-Algebra-With-Python

Lecture Notes for Linear Algebra Featuring Python. This series of lecture notes will walk you through all the must-know concepts that set the foundation of data science or advanced quantitative skillsets. Suitable for statistician/econometrician, quantitative analysts, data scientists and etc. to quickly refresh the linear algebra with the assistance of Python computation and visualization.

Language: Jupyter Notebook - Size: 19.6 MB - Last synced at: 30 days ago - Pushed at: 10 months ago - Stars: 2,428 - Forks: 589

mfem/mfem

Lightweight, general, scalable C++ library for finite element methods

Language: C++ - Size: 264 MB - Last synced at: 2 days ago - Pushed at: 2 days ago - Stars: 1,925 - Forks: 537

opensim-org/opensim-core

SimTK OpenSim C++ libraries and command-line applications, and Java/Python wrapping.

Language: C++ - Size: 215 MB - Last synced at: 3 days ago - Pushed at: 3 days ago - Stars: 888 - Forks: 334

ReScience/ReScience

The ReScience journal. Reproducible Science is Good. Replicated Science is better.

Size: 64.5 KB - Last synced at: 11 months ago - Pushed at: almost 3 years ago - Stars: 697 - Forks: 36

aiidateam/aiida-core

The official repository for the AiiDA code

Language: Python - Size: 127 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 490 - Forks: 226

pymc-devs/pytensor

PyTensor allows you to define, optimize, and efficiently evaluate mathematical expressions involving multi-dimensional arrays.

Language: Python - Size: 83.6 MB - Last synced at: 7 days ago - Pushed at: 7 days ago - Stars: 478 - Forks: 135

WLJSTeam/wolfram-js-frontend

Next-Gen Digital Notebook for Physics, Math, and Data Science. Freeware notebook environment for Wolfram Language written in Javascript

Language: HTML - Size: 446 MB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 425 - Forks: 21

VIDA-NYU/reprozip

ReproZip is a tool that simplifies the process of creating reproducible experiments from command-line executions, a frequently-used common denominator in computational science.

Language: Python - Size: 19.8 MB - Last synced at: about 20 hours ago - Pushed at: 7 months ago - Stars: 321 - Forks: 36

GLVis/glvis

Lightweight OpenGL tool for accurate and flexible finite element visualization

Language: C++ - Size: 6.16 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 289 - Forks: 53

lukasturcani/stk

A Python library which allows construction and manipulation of complex molecules, as well as automatic molecular design and the creation of molecular databases.

Language: Python - Size: 44.8 MB - Last synced at: 24 days ago - Pushed at: 7 months ago - Stars: 262 - Forks: 51

sthavishtha/list-lattice-Boltzmann-codes

Curated list of some open source codes employing lattice Boltzmann methods

Size: 77.1 KB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 169 - Forks: 43

tycho-kirchner/shournal

Log shell-commands and used files. Snapshot executed scripts. Fully automatic.

Language: C++ - Size: 2.7 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 167 - Forks: 9

INRIA/awesome-open-science-software

awesome open list of pointers about open science for software and computational science

Size: 40 KB - Last synced at: 16 days ago - Pushed at: 11 months ago - Stars: 147 - Forks: 19

asoplata/open-science-resources

A publicly-editable collection of open science resources, including tools, datasets, meta-resources, etc.

Size: 92.8 KB - Last synced at: about 1 month ago - Pushed at: almost 3 years ago - Stars: 117 - Forks: 17

yijiang1/fold_slice

Electron/X-ray ptychography and tomography/laminography

Language: MATLAB - Size: 291 MB - Last synced at: 29 days ago - Pushed at: 7 months ago - Stars: 93 - Forks: 33

OpenDreamKit/OpenDreamKit

Main repository for sharing files and documents about OpenDreamKit

Language: TeX - Size: 468 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 90 - Forks: 42

skoohy/GPT-PINN

Generative Pre-Trained Physics-Informed Neural Networks Implementation

Language: Python - Size: 3.1 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 85 - Forks: 18

dlr-wf/crackpy

Crack Analysis Tool in Python (CrackPy) - automatic detection and fracture mechanical analysis of (fatigue) cracks using digital image correlation

Language: Python - Size: 194 MB - Last synced at: 3 months ago - Pushed at: 10 months ago - Stars: 75 - Forks: 12

2prime/Paper-Reading

Paper Reading

Size: 11.3 MB - Last synced at: almost 2 years ago - Pushed at: about 7 years ago - Stars: 70 - Forks: 15

ese-msc/introduction-to-python

"Introduction to Python" course for future Imperial College London MSc students

Language: Jupyter Notebook - Size: 414 KB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 67 - Forks: 70

aromanro/PythonCompphys

Some python workbooks with various topics from Computational Physics

Language: Jupyter Notebook - Size: 62.4 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 59 - Forks: 12

IFMlab/ChemFlow

Computational Chemistry Workflows

Language: Python - Size: 243 MB - Last synced at: almost 2 years ago - Pushed at: almost 3 years ago - Stars: 44 - Forks: 3

usnistgov/hiperc

High Performance Computing Strategies for Boundary Value Problems

Language: HTML - Size: 63.4 MB - Last synced at: about 4 hours ago - Pushed at: over 1 year ago - Stars: 42 - Forks: 10

sciris/sciris

Fast, flexible tools to simplify scientific Python

Language: Python - Size: 13.6 MB - Last synced at: 17 minutes ago - Pushed at: 1 day ago - Stars: 39 - Forks: 13

khinsen/leibniz-pharo

Leibniz - a Digital Scientific Notation

Language: Smalltalk - Size: 6.9 MB - Last synced at: about 22 hours ago - Pushed at: 3 months ago - Stars: 35 - Forks: 3

GalerkinToolkit/GalerkinToolkit.jl

High-performance finite element toolbox in Julia

Language: Julia - Size: 59 MB - Last synced at: about 8 hours ago - Pushed at: about 9 hours ago - Stars: 31 - Forks: 1

Oden-EAG/hp3d

MPI/OpenMP hp-adaptive 3D finite element software

Language: Fortran - Size: 32.6 MB - Last synced at: about 22 hours ago - Pushed at: 16 days ago - Stars: 27 - Forks: 3

realabbas/list-of-algorithms

A comprehensive curated list of algorithms🤠 🏆

Size: 82 KB - Last synced at: 4 months ago - Pushed at: over 5 years ago - Stars: 27 - Forks: 5

yoavram/Py4Eng

Python for Engineers

Language: Jupyter Notebook - Size: 129 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 24 - Forks: 32

mehdiborji/nanoranger

simplified cellranger for long-read data

Language: Python - Size: 50.3 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 18 - Forks: 5

solvcon/solvcon

A software framework of conservation-law solvers that use the space-time Conservation Element and Solution Element (CESE) method.

Language: C++ - Size: 10.2 MB - Last synced at: 16 days ago - Pushed at: 11 months ago - Stars: 18 - Forks: 11

okkevaneck/prospr

Prospr is a universal toolbox for protein structure prediction within the HP-model. The Python package is based on a C++ core, which gives Prospr its high performance. The C++ core is made available as a separate zip file to facilitate high-performance computing applications. The package comes with many prediction algorithms and datasets to use.

Language: C++ - Size: 6.66 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 17 - Forks: 1

ITensor/Observers.jl

Store intermediate results of iterative methods.

Language: Julia - Size: 108 KB - Last synced at: about 1 month ago - Pushed at: about 1 year ago - Stars: 16 - Forks: 1

VIDA-NYU/reprozip-examples

Examples and demos for ReproZip

Language: HTML - Size: 30.1 MB - Last synced at: 3 months ago - Pushed at: over 2 years ago - Stars: 16 - Forks: 6

codenigma1/MITx-6.00.1x_Introduction-to-Computer-Science-and-Programming-Using-Python

An introduction to computer science as a tool to solve real-world analytical problems using Python 3.5.

Language: Python - Size: 568 KB - Last synced at: 7 months ago - Pushed at: over 4 years ago - Stars: 16 - Forks: 9

elfi-dev/notebooks

Notebook tutorials

Language: Jupyter Notebook - Size: 11 MB - Last synced at: about 1 year ago - Pushed at: over 1 year ago - Stars: 13 - Forks: 8

2AUK/pyRISM

Implementation of the Reference Interaction-Site Model (RISM) equation

Language: Rust - Size: 628 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 12 - Forks: 1

MineralsCloud/qe-demystify

Demystify the undocumented Quantum ESPRESSO input/output

Size: 28.3 KB - Last synced at: about 13 hours ago - Pushed at: over 1 year ago - Stars: 12 - Forks: 2

volpatto/firedrake_scripts

Minimal working examples applying Finite Element Method with Firedrake framework

Language: Python - Size: 329 KB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 11 - Forks: 4

elvis-sik/muscle_synergies

Extract muscle synergies from experimental data obtained using Vicon Nexus using non-negative matrix factorisation.

Language: Jupyter Notebook - Size: 17.1 MB - Last synced at: over 1 year ago - Pushed at: over 3 years ago - Stars: 11 - Forks: 0

cghiaus/dm4bem

Dynamic models for building energy management

Language: Jupyter Notebook - Size: 11.4 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 10 - Forks: 10

andthum/mdtools

Scripts to prepare and analyze molecular dynamics simulations

Language: Python - Size: 12.7 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 9 - Forks: 2

RexGalilae/vasp-tools

A suite of scripts and modules that perform menial, tedious and repetitive tasks and operations on VASP files that were hurriedly and haphazardly put together by some intern.

Language: Python - Size: 11.2 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 9 - Forks: 3

L1ssandra/Simple-Fortran-DG

A simple Fortran program of Discontinuous Galerkin method(no Limiter now) solving 2D Euler Equation with the Isentropic Vortex initial value.

Language: Fortran - Size: 1.33 MB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 8 - Forks: 5

dutta-alankar/PH-354-2019-IISc-Assignment-Problems

Solutions to the complete set of assignment problems which I did while crediting Computational Physics course by Prof. Manish Jain at IISc, Physical Sciences department on 2019

Language: Python - Size: 44.3 MB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 8 - Forks: 5

nschorgh/CompSciBook

Supplementary material for book on scientific computing

Language: TeX - Size: 4.94 MB - Last synced at: over 2 years ago - Pushed at: over 2 years ago - Stars: 7 - Forks: 4

ConsenSysMesh/hellhound-vm

Language: Go - Size: 52.7 KB - Last synced at: 6 days ago - Pushed at: over 6 years ago - Stars: 7 - Forks: 4

JuDFTteam/aiida-jutools

Tools for simplifying daily work with the AiiDA workflow engine

Language: Python - Size: 36.3 MB - Last synced at: 3 months ago - Pushed at: 12 months ago - Stars: 6 - Forks: 6

itislab/alpheus

Alpheus: A tool for organizing and managing computational experiments

Language: F# - Size: 813 KB - Last synced at: 17 days ago - Pushed at: over 2 years ago - Stars: 6 - Forks: 5

camierjs/nabla

The ∇ numerical-analysis DSL improves productivity and enables new algorithmic developments for the construction of hierarchical HPC scientific applications.

Language: C - Size: 6.96 MB - Last synced at: 2 months ago - Pushed at: about 7 years ago - Stars: 6 - Forks: 1

pradeepsinngh/numerical-solutions-for-PDE

Numerical Solutions for PDE's | Heat Equation, Poisson Equation, Wave Equation

Language: Matlab - Size: 509 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 6 - Forks: 2

Mehrdadghassabi/Gracc 📦

Graph theory approach for Modeling Electrical Circuits

Language: Jupyter Notebook - Size: 8.59 MB - Last synced at: about 1 month ago - Pushed at: about 1 month ago - Stars: 5 - Forks: 0

moritzgubler/vc-sqnm

Implementation of the vc-sqnm and sqnm optimization algorithms in C++

Language: Fortran - Size: 226 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 5 - Forks: 0

Chaoses-Ib/ComputationalMathematics

Language: Jupyter Notebook - Size: 2.31 MB - Last synced at: about 2 months ago - Pushed at: 3 months ago - Stars: 5 - Forks: 0

carlosalvarezh/Metodos_Numericos

Curso de Métodos Numéricos empleando las herramientas Jupyter Notebook y programado en Python V3.8

Language: Jupyter Notebook - Size: 14.6 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 5 - Forks: 6

Computer-Kurzweil/diffusion-limited-aggregation

Diffusion-limited aggregation (DLA) is the process whereby particles undergoing a random walk due to Brownian motion cluster together to form aggregates of such particles.

Language: Java - Size: 1.2 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 5 - Forks: 0

magshaban/Poisson2D_FEM

This program Solves Poisson 2D equation using Finite element method.

Language: Python - Size: 3.25 MB - Last synced at: about 1 year ago - Pushed at: over 4 years ago - Stars: 5 - Forks: 0

cjmlgrto/fit3139-notes

Summary notes for FIT3139 — Introduction to Computational Science

Size: 40 KB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 5 - Forks: 0

Computer-Kurzweil/simulated-evolution

Artificial Life Simulation of Bacteria Motion depending on DNA

Language: Java - Size: 1.59 MB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 4 - Forks: 10

americocunhajr/UERJ-UQ-CSE

Uncertainty Quantification for Computational Science and Engineering

Size: 153 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 3 - Forks: 2

gmu-cil/AIT602

Course materials about the AIT 602 Introduction to Research in Applied IT course. This course covers a broad spectrum of scientific research methods such as computational methods.

Language: Jupyter Notebook - Size: 951 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 3 - Forks: 13

ibralyousef/UnderGrad

My undergraduate projects

Language: Jupyter Notebook - Size: 92.2 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 3 - Forks: 0

jakubowiczish/mownit

Solutions for Computation Methods for Science and Technology 2 assignment, written in C, Julia and R

Language: Jupyter Notebook - Size: 10.6 MB - Last synced at: over 2 years ago - Pushed at: about 3 years ago - Stars: 3 - Forks: 1

diehlpk/wfm2020 📦

Workshop on Experimental and Computational Fracture Mechanics

Language: TeX - Size: 813 KB - Last synced at: about 1 year ago - Pushed at: about 5 years ago - Stars: 3 - Forks: 0

Panadestein/blog

First atop infinity

Language: BQN - Size: 1.84 MB - Last synced at: 1 day ago - Pushed at: 1 day ago - Stars: 2 - Forks: 0

NonDairyNeutrino/Thesis

Thesis for the Computational Science Master's program at Central Washington University. 3D extension of an analog of cosmological particle creation in a Friedmann-Robertson-Walker universe by numerically simulating a Bose-Einstein condensate with a time-dependent scattering length.

Language: TeX - Size: 14.3 MB - Last synced at: 22 days ago - Pushed at: 22 days ago - Stars: 2 - Forks: 0

andthum/transfer_Li

Transfer Li ions from cathode to anode in MD simulations

Language: Shell - Size: 200 KB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 2 - Forks: 0

wisupai/CRESP-DOCS

CRESP (Computational Research Environment Standardization Protocol) is a standardized protocol for defining computational experiment environments, ensuring reproducibility and cross-platform consistency by specifying hardware, software, data, randomness control, version management, and automated deployment in a unified configuration file.

Language: TypeScript - Size: 6.13 MB - Last synced at: 2 days ago - Pushed at: 4 months ago - Stars: 2 - Forks: 0