Nealelab/UKBB_ldsc

Sample code for ldsc analyses in UKBB

Language: CSS - Size: 40.5 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 24 - Forks: 13

PaulSchmidtGit/Heritability

Heritability in plant breeding - R and SAS code examples

Language: SAS - Size: 721 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 17 - Forks: 21

lcrawlab/i-LDSC

Code and simulations using interaction-LD score regression

Language: Python - Size: 15.4 GB - Last synced at: 6 months ago - Pushed at: 11 months ago - Stars: 12 - Forks: 1

lorinanthony/MAPIT

Code and Tutorials for Running the MArginal ePIstasis Test (MAPIT)

Language: C++ - Size: 65.4 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 11 - Forks: 3

p4rkerw/Wilson_Muto_NComm_2022

Containerized workflow for analysis of human diabetic kidney disease by snRNA-seq and snATAC-seq

Language: R - Size: 815 KB - Last synced at: about 2 years ago - Pushed at: about 2 years ago - Stars: 8 - Forks: 2

rivas-lab/mvpmm

MultiVariate Polygenic Mixture Model

Language: R - Size: 14.1 MB - Last synced at: over 1 year ago - Pushed at: about 5 years ago - Stars: 6 - Forks: 3

Zhiwen-Owen-Jiang/heig

Highly Efficient Imaging Genetics (HEIG)

Language: Python - Size: 7.42 MB - Last synced at: 11 days ago - Pushed at: 11 days ago - Stars: 5 - Forks: 1

esohkevin/ei-gwas

gwas workflow from raw intensity data to in-silico functional mapping

Language: Shell - Size: 709 KB - Last synced at: 11 days ago - Pushed at: about 1 month ago - Stars: 3 - Forks: 0

OrangePomeranian/methods_of_genetic_evaluation_of_animals

The project focused on the analysis of foxes from 3 different farms and the subsequent presentation of trait heritability results, genetic trends, breeding values and relationship matrix.

Language: Jupyter Notebook - Size: 24.5 MB - Last synced at: 7 months ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 1

chanwkimlab/regional_heritability_analysis

Regional Heritability Analysis is a software package for estimating regional heritability of small genomic segments.

Language: Jupyter Notebook - Size: 31.2 MB - Last synced at: about 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 0

UDC-GAC/toxo

A library for calculating penetrance tables of any bivariate epistasis model.

Language: MATLAB - Size: 129 KB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 1 - Forks: 2

jinghuazhao/hess-pipeline

HESS pipeline

Language: Shell - Size: 30.4 MB - Last synced at: over 2 years ago - Pushed at: over 6 years ago - Stars: 1 - Forks: 0

jraffa/pedRSP

Pedigree Relatedness Summary Parameters R package

Language: R - Size: 15.6 KB - Last synced at: 8 days ago - Pushed at: about 9 years ago - Stars: 1 - Forks: 0

kevolve/heritability-meta

Analysis for the manuscript: 'Coral adaptation to climate change: Meta-analysis reveals high heritability across multiple traits', published in Global Change Biology

Language: HTML - Size: 53.4 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 0 - Forks: 0

neurodata/connectomic-heritability

Language: Python - Size: 95.9 MB - Last synced at: 3 months ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0

bayarpark/nldsc

Non-Additive LD Score Regression

Language: C++ - Size: 147 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0

RanranZhai/CRISPR

This repository includes scripts used in "Contribution of CRISPRable DNA on human complex traits"

Language: R - Size: 40 KB - Last synced at: almost 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0

PDRohde/ugnome

This repository contains the R package ugnome which is a collection of utility functions for statistical genetic analyses.

Language: R - Size: 72.3 KB - Last synced at: 5 months ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

Angelovici-Lab/BioTools

BioTools is a repository that has many scripts which can be utilized to solve biological problems.

Language: R - Size: 137 KB - Last synced at: over 2 years ago - Pushed at: almost 4 years ago - Stars: 0 - Forks: 0

fontikar/circus

R package for wrangling and summarising 'animal' brms models

Language: R - Size: 122 MB - Last synced at: over 2 years ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0

brunoharlein/POO_recall

examples Python OOP

Language: Python - Size: 11.7 KB - Last synced at: about 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 1

ingaschwabe/BayesTwin

Developmental version of R package BayesTwin

Language: R - Size: 1.3 MB - Last synced at: 7 months ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 2

jdreyf/max-accuracy-genetic-pred

Code to accompany the paper "How accurate can genetic predictions be?" by Dreyfuss, Levner, et al.

Language: R - Size: 5.86 KB - Last synced at: over 2 years ago - Pushed at: over 7 years ago - Stars: 0 - Forks: 0