Topic: "introgression"
jbpease/dfoil
DFOIL: Introgression Testing for Five Taxa
Language: Python - Size: 2.64 MB - Last synced at: over 1 year ago - Pushed at: almost 4 years ago - Stars: 26 - Forks: 9
btmartin721/ClineHelpR
Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clines and hybrid indices with Environmental Variables
Language: R - Size: 93.4 MB - Last synced at: 11 months ago - Pushed at: almost 3 years ago - Stars: 16 - Forks: 1
xin-huang/sstar
Detecting Archaic Introgression from Population Genetic Data with S*
Language: Python - Size: 64.5 MB - Last synced at: 18 days ago - Pushed at: 18 days ago - Stars: 6 - Forks: 4
pievos101/Introgression-Simulation
Introgression Simulation using ms and seq-gen
Language: R - Size: 10.7 KB - Last synced at: 8 months ago - Pushed at: 8 months ago - Stars: 2 - Forks: 0
rancilhac/Introgression-tests-from-gene-trees
Script for detecting signals of introgression in large set of gene trees from unlinked markers
Language: R - Size: 26.4 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 2 - Forks: 0
btmartin721/phylip2eigenstrat
Python script to generate .snp and .ind Eigenstrat files from a PHYLIP infile
Language: Python - Size: 238 KB - Last synced at: over 1 year ago - Pushed at: about 7 years ago - Stars: 2 - Forks: 1
nicolo-tellini/intropipeline
Detection of Saccharomyces paradoxus DNA across Saccharomyces cerevisiae, and vice versa.
Language: R - Size: 105 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0
bjarnebartlett/Interspecific-Breeding-History-of-Hawaiian-Macadamia
Revealing the Interspecific Breeding History of Hawaiian Macadamia through Transcriptome Sequencing and AnalysisÂ
Language: R - Size: 89.6 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 1
xin-huang/gaia
Genomic Analysis of Introgressed Alleles with Machine Learning
Language: Python - Size: 2.65 MB - Last synced at: 4 months ago - Pushed at: 4 months ago - Stars: 0 - Forks: 1
zhuochenbioinfo/3KRG-HAP
Haplotype marker based on 3,000 Rice Genomes for subpopulation inference
Language: Perl - Size: 39 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 0 - Forks: 2
nicolo-tellini/ils-pipeline
ABBA-BABA test conducted on Saccharomyces cerevisiae strains using whole-genome alignment.
Language: R - Size: 71.3 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
rtfcoimbra/Coimbra-et-al-2023_BMCBiol
Code used to analyse WGS data of giraffe in Coimbra et al. 2023
Language: R - Size: 81.1 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
btmartin721/makePopMap
Python script to add population identifiers to STRUCTURE, PLINK, and PHYLIP files
Language: Python - Size: 50.8 KB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 1