kegg-ortholog | Topic | Ecosyste.ms: Repos

Topic: "kegg-ortholog"

iquasere/KEGGCharter

A tool for representing genomic potential and transcriptomic expression into KEGG pathways

Language: Python - Size: 519 MB - Last synced at: 4 months ago - Pushed at: about 1 year ago - Stars: 54 - Forks: 7

FlyPythons/KEGGTools

A collection of tools to download and process KEGG database

Language: Python - Size: 1.12 MB - Last synced at: over 2 years ago - Pushed at: about 7 years ago - Stars: 19 - Forks: 2

iliapopov17/KEGGaNOG

🤝 Tool for mining KEGG pathways completeness data from eggNOG-mapper annotations

Language: Python - Size: 15.7 MB - Last synced at: 19 days ago - Pushed at: 3 months ago - Stars: 10 - Forks: 1

This module extends the Tripal Analysis Module and provides a method for loading of KEGG ortholog assignments derived from the KEGG Automated Annotation Server (KAAS). The module reads the compressed .heir file or alternatively an expanded heir directory. KEGG assignments appear on each feature page, and a full KEGG report is available for browsing results once uploaded.

Language: PHP - Size: 5.55 MB - Last synced at: 4 months ago - Pushed at: over 6 years ago - Stars: 2 - Forks: 6

ctSkennerton/kegg_hmm_models

Create HMMs from KEGG orthologs

Language: Makefile - Size: 5.86 KB - Last synced at: 4 months ago - Pushed at: about 7 years ago - Stars: 2 - Forks: 1

Lachiemckbioinfo/KEGGChem

KEGG-Chem is a Python program designed to retrieve KEGG compounds and associated data using an input of KEGG orthologues or modules, and can also retrieve SMILES, SDF files, and more from PubChem.

Language: Python - Size: 302 KB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 0 - Forks: 0