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Topic: "mechanistic-modeling"

ulysseherbach/harissa

Simulation and inference of gene regulatory networks based on transcriptional bursting

Language: Python - Size: 1.45 MB - Last synced at: 12 days ago - Pushed at: about 1 month ago - Stars: 10 - Forks: 1

blakeaw/pysb-pkpd

PySB add-on providing domain-specific macros and models for empirical and mechanistic PK/PD modeling.

Language: Jupyter Notebook - Size: 191 KB - Last synced at: 19 days ago - Pushed at: about 1 month ago - Stars: 6 - Forks: 5

Plant-Food-Research-Open/FieldNBalance

Nitrogen balance model components and test procedures

Language: Jupyter Notebook - Size: 164 MB - Last synced at: 11 months ago - Pushed at: 11 months ago - Stars: 2 - Forks: 4

SPARCED/SPARCED

Mechanistic Pan-Cancer Signaling Model

Language: Jupyter Notebook - Size: 76.9 MB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 1 - Forks: 4

arnaou/dig4bio-workshops

The Dig4Bio worskhop series

Language: Jupyter Notebook - Size: 34.8 MB - Last synced at: 6 months ago - Pushed at: 6 months ago - Stars: 1 - Forks: 0

Borealis-BioModeling/pysb-units

PySB add-on providing utilities to add units to models and perform dimensional analysis.

Language: Python - Size: 132 KB - Last synced at: 20 days ago - Pushed at: 9 months ago - Stars: 1 - Forks: 0

harissa-framework/harissa

Simulation and inference of gene regulatory networks based on transcriptional bursting

Language: Python - Size: 7.04 MB - Last synced at: about 1 year ago - Pushed at: about 1 year ago - Stars: 1 - Forks: 0

its-Pa1/2D_Hypoxia_Modeling

This repository contains the codes for the article: Data-driven mechanistic modeling of oxygen distribution and hypoxia profile in tumor microenvironment

Language: MATLAB - Size: 147 MB - Last synced at: 10 months ago - Pushed at: 10 months ago - Stars: 0 - Forks: 0