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Topic: "multiple-sequence-alignments"

JLSteenwyk/PhyKIT

a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies

Language: Python - Size: 17.5 MB - Last synced at: 1 day ago - Pushed at: about 1 month ago - Stars: 74 - Forks: 8

aaravdave/MSAffect

MSAffect is a computational pipeline to evaluate the robustness of AlphaFold2 protein structure predictions under adversarial MSA perturbations to identify structural sensitivity and confidence shifts in neural-network-based folding.

Language: Python - Size: 654 MB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 5 - Forks: 0

pkncsk/ma_mapper

A python package for mapping genome-wide data onto multiple alignment of transposable elements.

Language: Python - Size: 115 MB - Last synced at: 18 days ago - Pushed at: 18 days ago - Stars: 0 - Forks: 0