Topic: "multiplex-imaging"
AstroPathJHU/AstroPathPipeline
The AstroPath Pipeline was developed to process whole slide multiplex immunofluorescence data from microscope to database at single cell resolution.
Language: Python - Size: 1.28 GB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 18 - Forks: 3
jeliason/SHADE
An R package for modeling asymmetric spatial associations between cell types in tissue images using a multilevel Bayesian framework.
Language: HTML - Size: 738 KB - Last synced at: 12 days ago - Pushed at: 12 days ago - Stars: 0 - Forks: 0
jeliason/mgpp_TME
A reproducible framework for modeling spatial cell–cell interactions in the tumor microenvironment using multitype Gibbs point processes and multiplexed imaging data.
Language: R - Size: 99.5 MB - Last synced at: 21 days ago - Pushed at: 21 days ago - Stars: 0 - Forks: 0