Topic: "partial-order-alignment"
NVIDIA-Genomics-Research/GenomeWorks
SDK for GPU accelerated genome assembly and analysis
Language: Cuda - Size: 20.7 MB - Last synced at: 12 days ago - Pushed at: about 1 year ago - Stars: 291 - Forks: 75
yangao07/abPOA
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
Language: C - Size: 25.8 MB - Last synced at: about 23 hours ago - Pushed at: about 1 month ago - Stars: 123 - Forks: 18
yangao07/TideHunter
TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain
Language: C - Size: 48.9 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 24 - Forks: 4
Xinglab/TideHunter
TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain
Language: C - Size: 48.8 MB - Last synced at: 12 months ago - Pushed at: 12 months ago - Stars: 18 - Forks: 2
Xinglab/abPOA
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
Language: C - Size: 26 MB - Last synced at: about 1 year ago - Pushed at: almost 2 years ago - Stars: 12 - Forks: 3
AndreaGuarracino/WFPOA 📦
An extension to the wavefront algorithm that generalizes it to work on directed acyclic sequence graphs
Language: C - Size: 438 KB - Last synced at: 2 months ago - Pushed at: over 3 years ago - Stars: 9 - Forks: 0
hitbc/TideHunter
TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain
Language: C - Size: 435 KB - Last synced at: almost 2 years ago - Pushed at: over 4 years ago - Stars: 1 - Forks: 1
spyisgooddawg/Genome
Genome is a platform for exploring and analyzing genetic data. Join us in advancing genomic research and collaboration! 🧬🌐
Size: 3.91 KB - Last synced at: 6 days ago - Pushed at: 6 days ago - Stars: 0 - Forks: 0
