Topic: "qpcr-analysis"
ropensci/tidyqpcr
quantitative PCR analysis in the tidyverse
Language: R - Size: 17.4 MB - Last synced at: about 14 hours ago - Pushed at: about 1 year ago - Stars: 53 - Forks: 18
NoahHenrikKleinschmidt/qpcr
A python package to analyse qPCR data for single-use or high-throughput application
Language: Python - Size: 9.79 MB - Last synced at: about 4 hours ago - Pushed at: 3 months ago - Stars: 23 - Forks: 6
MahShaaban/intro_data_r
A gentle introduction to data analysis in R
Language: Dockerfile - Size: 4.51 MB - Last synced at: 3 months ago - Pushed at: almost 2 years ago - Stars: 5 - Forks: 2
nf-core/stableexpression
Pipeline dedicated to finding the most stable genes among a single or multiple expression dataset(s). It is useful in particular for finding the most suitable RT-qPCR reference genes for a specific species.
Language: Nextflow - Size: 10.7 MB - Last synced at: 3 months ago - Pushed at: 3 months ago - Stars: 4 - Forks: 1
ramiromagno/vermeulen
Biomarker data set by Vermeulen et al. (2009)
Language: R - Size: 76.4 MB - Last synced at: about 1 month ago - Pushed at: over 1 year ago - Stars: 3 - Forks: 1
NoahHenrikKleinschmidt/Qupid
Qupid (Quantitative PCR Interface to Delta-Delta-Ct) - a versatile web-application for swift Delta-Delta-Ct analysis of qPCR data
Language: Python - Size: 2.92 MB - Last synced at: 4 months ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0
srinew/qPCR-Norm
An easy way to normalize CT values to Internal controls as well as housekeeping genes and download as heatmap.
Language: R - Size: 15.6 KB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 3 - Forks: 0
AGSeifert/DoubleqpcR
R Package accomodating research for DMAS-qPCR study
Language: R - Size: 3.56 MB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 2 - Forks: 0
asalimih/InterOpt
InterOpt: Improved gene expression quantification in qPCR experiments using weighted aggregation of reference genes
Language: R - Size: 2.62 MB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 2 - Forks: 0
dcorujog/qpcr-shiny
Shiny app to analyze qPCR data
Language: R - Size: 9.77 KB - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
Danny-the-scientist/qpcr-sars
Calculation of SARS viral particles present in qPCR'd wastewater sample
Language: C++ - Size: 1.95 KB - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 1 - Forks: 0
ericksamera/probe-tester
Repo for testing qPCR assays by downloading genomes and in-silico PCR.
Language: Python - Size: 25.4 KB - Last synced at: 4 days ago - Pushed at: 5 days ago - Stars: 0 - Forks: 0
eleni-chr/qPCR-replicate-analysis
Process qPCR data to evaluate the consistency and reliability of Ct values across technical triplicates.
Language: MATLAB - Size: 3.32 MB - Last synced at: 24 days ago - Pushed at: 24 days ago - Stars: 0 - Forks: 0
GabPescador/qPCRAnalysis
R Package to analyze and plot RT-qPCR data from QuantStudio software.
Language: R - Size: 1020 KB - Last synced at: 2 months ago - Pushed at: 2 months ago - Stars: 0 - Forks: 0
sebastian-gregoricchio/Rseb
An R-package for daily tasks required to handle biological data as well as avoid re-coding of small functions for quick but necessary data management.
Language: R - Size: 10.5 MB - Last synced at: 4 months ago - Pushed at: 6 months ago - Stars: 0 - Forks: 1
ShuXingYu94/real-timer
qPCR-calculate
Language: Python - Size: 104 KB - Last synced at: over 1 year ago - Pushed at: over 1 year ago - Stars: 0 - Forks: 0
FemkeAhlers/Pneumococcal_PCR
Code for an upcoming paper on pneumococcal PCR-based diagnostics.
Language: R - Size: 92.8 KB - Last synced at: over 1 year ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
YixiBio/qPCRstat
Created primarily to process qPCR Cq data for graphical output. However, the functions included is generic and good for other use. This package includes functions to calculate the fold change using either ddCt method or Paffl method, and function to calculate SEM and check outliers in a given dataset.
Language: R - Size: 69.3 KB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
dcorujog/qpcr-script
Function for the analysis of qPCR data
Language: R - Size: 2.93 KB - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 0 - Forks: 0
ayushnoori/qpcrtools
R package for the analysis and visualization of RT-qPCR data.
Language: R - Size: 33.2 KB - Last synced at: over 2 years ago - Pushed at: about 4 years ago - Stars: 0 - Forks: 0
