Topic: "wright-fisher-model"
zhangyi-he/WFM-1L-DiffusApprox-MLE
Estimation of natural selection and allele age from time series allele frequency data using a novel likelihood-based approach
Language: R - Size: 77.1 KB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 3 - Forks: 0
TomMakesThings/Wright-Fisher-Simulator
Simulator for the Wright-Fisher model of genetic drift for haploid and diploid populations
Language: Jupyter Notebook - Size: 22.8 MB - Last synced at: about 2 years ago - Pushed at: over 2 years ago - Stars: 1 - Forks: 0
zhangyi-he/WFM-1L-DiffusApprox-PMMHwGibbs
Estimating temporally variable selection intensity from ancient DNA data with a combination of forward- and backward-in-time simulations
Language: R - Size: 722 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 0 - Forks: 0
zhangyi-he/WFM-1L-DiffusApprox-PMMH
Estimating temporally variable selection intensity from ancient DNA data
Language: R - Size: 229 KB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
zhangyi-he/WFM-2L-DiffusApprox-AdaptPMMH
Estimating temporally variable selection intensity from ancient DNA data with the flexibility of modelling linkage and epistasis
Language: R - Size: 988 KB - Last synced at: almost 2 years ago - Pushed at: about 2 years ago - Stars: 0 - Forks: 0
zhangyi-he/WFM-2L-Approx
Approximations for the Wright-Fisher model of population dynamics under natural selection at two linked loci
Language: R - Size: 183 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
zhangyi-he/WFM-1L-DiffusApprox-BlockPMMH-Gallus
Inferring the timing and strength of natural selection and gene migration in the evolution of chickens from ancient DNA data
Language: R - Size: 116 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
zhangyi-he/WFM-2L-DiffusApprox-PMMH
Detecting and quantifying natural selection at two linked loci from time series data of allele frequencies with forward-in-time simulations
Language: R - Size: 190 KB - Last synced at: almost 2 years ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
VeaLi/Stats
Poker test for independence, Inversion method, Method of approximations, Rejection method, Quadratic congruent random number generator, Freedman–Diaconis rule, Fixation Index, Extended Haplotype Homozygosity, Wright-Fisher model
Language: Python - Size: 155 KB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 0 - Forks: 0
