Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

Package Usage: conda: delly

View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/delly

Dependent Repos 15

tdayris/snakemake-wrappers Fork of snakemake/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
  • 1.1.5.* bio/delly/environment.yaml

Size: 735 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

Clinical-Genomics-Lund/SomaticPanelPipeline
  • 0.8.7.* container/environment.yml

Size: 5.29 MB - Last synced: about 2 months ago - Pushed: 2 months ago

SherineAwad/StructureVariations
Snakemake pipeline for detecting, annotating, filtering and visualising structure variations and gene fusions from WGS/WES.
  • 0.7.3.* environment.yml

Size: 548 KB - Last synced: 9 months ago - Pushed: over 1 year ago

cibinsb/snakemake-wrappers Fork of snakemake/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
  • 1.1.* bio/delly/environment.yaml

Size: 217 MB - Last synced: 20 days ago - Pushed: 20 days ago

snakemake/snakemake-wrappers
This repository contains wrapper scripts for fast integration of command line tools.
  • 0.7.9 bio/delly/environment.yaml

Size: 13 MB - Last synced: almost 2 years ago

mcveanlab/Corticall
Germline DNM caller based on LdBG assembly of pathogens
  • cromwell/docker/gridss/environment.yml
  • cromwell/docker/sv/environment.yml

Size: 128 MB - Last synced: 9 months ago - Pushed: about 4 years ago

biominer-lab/omics-workflow-images
Docker images for omics workflow.
  • 1.0.3 dnaseq-sv-workflow/environment.yml

Size: 33.8 MB - Last synced: over 1 year ago - Pushed: over 1 year ago

BCCDC-PHL/troika-nf
A Nextflow wrapper for the Troika pipeline
  • 0.8.7.* environments/environment.yml

Size: 9.77 KB - Last synced: about 2 months ago - Pushed: almost 3 years ago

seqan/iGenVar
The official repository for the iGenVar project.
  • 1.0.3.* test/benchmark/envs/environment.yml

Size: 43.2 MB - Last synced: 3 months ago - Pushed: over 1 year ago

jana_ebler/genotyping-experiments
  • 0.8.1 env/environment.yml

Size: 22.7 MB - Last synced: over 1 year ago

eudesbarbosa/snappy-pipeline Fork of bihealth/snappy-pipeline
SNAPPY Nucleic Acid Processing in Python
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline/call/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline/genotype/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline/merge_calls/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline/merge_genotypes/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/call/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/filter/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/genotype/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/merge_calls/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/merge_genotypes/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/call/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/filter/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/final_vcf/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/genotype/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/merge_calls/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/merge_genotypes/environment.yaml

Size: 2.16 MB - Last synced: over 1 year ago - Pushed: over 1 year ago

pd321/snakemake-wrappers Fork of snakemake/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
  • 1.1.5.* bio/delly/environment.yaml

Size: 228 MB - Last synced: 8 months ago - Pushed: 11 months ago

Phlya/snakemake-wrappers Fork of snakemake/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
  • 1.1.5.* bio/delly/environment.yaml

Size: 229 MB - Last synced: 10 months ago - Pushed: 11 months ago

mbosio85/CNVcall
CNVcall pipeline for WGS data
  • 0.8.1.* environment.yml

Size: 76.2 KB - Last synced: over 1 year ago - Pushed: over 4 years ago

luozhy88/atlas
  • 1.1.6.* snakemake-wrappers/raw/v1.19.1/bio/delly/environment.yaml

Size: 213 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

casperch/snakemake-wrappers
snakemake-wrappers
  • 0.8.1 bio/delly/environment.yaml

Size: 119 MB - Last synced: about 2 months ago - Pushed: almost 4 years ago

pdimens/snakemake-wrappers Fork of snakemake/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
  • 1.1.6.* bio/delly/environment.yaml

Size: 229 MB - Last synced: 8 months ago - Pushed: 8 months ago

bihealth/snappy-pipeline
SNAPPY Nucleic Acid Processing in Python
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline/call/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline/genotype/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline/merge_calls/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline/merge_genotypes/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/call/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/filter/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/genotype/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/merge_calls/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/germline_cnv/merge_genotypes/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/call/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/filter/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/final_vcf/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/genotype/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/merge_calls/environment.yaml
  • 1.1.3 snappy_wrappers/wrappers/delly2/somatic/merge_genotypes/environment.yaml

Size: 7.57 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

Clinical-Genomics-Lund/nextflow_wgs
  • 0.8.3.* container/environment.yml

Size: 9.71 MB - Last synced: about 2 months ago - Pushed: 2 months ago

shachar5020/TransformerMIL4ReceptorPrediction
  • 0.7.6 environment.yml

Size: 50.8 KB - Last synced: 4 months ago - Pushed: 4 months ago

caballero/snakemake-delly
  • workflow/envs/environment.yaml

Size: 7.81 KB - Last synced: 3 months ago - Pushed: 3 months ago

nf-core/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
  • 1.1.6.* modules/nf-core/delly/call/environment.yml

Size: 146 MB - Last synced: 2 months ago - Pushed: 2 months ago