Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

Package Usage: conda: perl-threaded

View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/perl-threaded

Dependent Repos 16

ZhenyanLuo/FindPlantNLRs
  • 5.26.0 environment.yml

Size: 361 KB - Last synced: 4 months ago - Pushed: 4 months ago

afuentri/B-MyRepCLL
pipeline for a consensus-oriented analysis of B-cell clones
  • 5.32.1 environment.yml

Size: 291 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

luisacusick/VC-Optimus
Bioinformatics pipeline to take short reads, align them to a reference, and call SNPs.
  • 5.26.0 environment.yml

Size: 138 KB - Last synced: about 1 year ago - Pushed: about 3 years ago

liaoherui/StrainScan
High-resolution strain-level microbiome composition analysis tool based on reference genomes and k-mers
  • 5.26.0 environment.yaml

Size: 56.7 MB - Last synced: 7 days ago - Pushed: about 1 month ago

bokulich-lab/advanced-comp-bio-tutorial
Hands-on demonstration of 16S rRNA gene sequence analysis for SysBio Advanced Block Course 2022
  • 5.26.0 environment.yml

Size: 77.9 MB - Last synced: 12 months ago - Pushed: 12 months ago

kirbyvisp/marmo
MARMO is a Modular and Robust pipeline for iMmune single-cell multi-Omics implemented in Snakemake.
  • 5.22.0 environment.yaml

Size: 2.86 MB - Last synced: over 1 year ago

kirbyvisp/vdjpuzzle
  • 5.22.0.* environment.yml

Size: 37.8 MB - Last synced: over 1 year ago

mr-eyes/denovo-rnaseq
De novo assembly, Differential gene expression, and annotation workflow
  • 5.32.1 environment.yml

Size: 1.79 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

gwcbi/haphpipe
NGS viral assembly and population genetics
  • 5.22.0 environment.yml

Size: 2.35 MB - Last synced: 7 months ago - Pushed: about 3 years ago

BackofenLab/CRISPRtracrRNA
  • 5.26.0 environment.yml

Size: 28.6 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

kirbyvisp/vdjpuzzle2
VDJPuzzle version 2
  • 5.22.0 environment.yaml

Size: 29.7 MB - Last synced: over 1 year ago

deconvolute/subgenome
Identification of druggable genes in pathogenic bacteria – subtractive genomics approach
  • 5.32.1 environment.yml

Size: 10.6 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

computational-chemical-biology/cis_reg
  • 5.32.1 environment.yml

Size: 16.2 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

SteMIDIfactory/P-DOR
Quick and easy outbreak reconstruction pipeline
  • 5.32.1 environment.yml

Size: 37.7 MB - Last synced: 3 months ago - Pushed: 8 months ago

bioinformatics-lab/BioDragon
  • 5.22.0 environment.yml

Size: 10.9 MB - Last synced: about 1 year ago - Pushed: over 6 years ago

bioinformatics-lab/scratch
  • 5.22.0 environment.yml

Size: 10.8 MB - Last synced: about 1 year ago - Pushed: about 6 years ago

simonorozcoarias/G-SAIP
Graphical sequence alignment though High Performance Computing in the post-genomic era
  • 5.26.0 TestRepo/QualityTest/ArabidopsisRun/environment.yml

Size: 11.8 MB - Last synced: 29 days ago - Pushed: over 1 year ago

bfairkun/Comparative_eQTL
Primary data: Chimp eQTLs called from heart tissue samples
  • 5.22.0 code/snakemake_workflow/envs/environment.yml

Size: 583 MB - Last synced: 9 months ago - Pushed: over 3 years ago

Oodnadatta/Hugodims-pipeline-2
  • 5.22.0 environment.yml

Size: 3.91 KB - Last synced: 13 days ago - Pushed: about 7 years ago

jackkamm/snippy-false-negatives
  • 5.22.0 environment.yaml

Size: 4.88 KB - Last synced: about 1 year ago - Pushed: over 5 years ago

dridk/primersnp
From primers sequence, check if snp from dbSNP are present
  • 5.22.0 environment.yml

Size: 3.91 KB - Last synced: 13 days ago - Pushed: about 7 years ago

daewoooo/IntegrativePhasingPaper
Supplementary files for the study "Dense and accurate whole-chromosome haplotyping of individual genomes"
  • 5.22.0 environment.yml

Size: 7.65 MB - Last synced: 3 days ago - Pushed: over 6 years ago

xie186/ViewBS
ViewBS - a powerful toolkit for visualization of high-throughput bisulfite sequencing data
  • environment.yaml

Size: 7.55 MB - Last synced: 7 months ago - Pushed: 11 months ago

Miachol/vdjpuzzle2
  • 5.22.0 environment.yaml

Size: 28.8 MB - Last synced: about 1 year ago - Pushed: about 5 years ago

shachar5020/TransformerMIL4ReceptorPrediction
  • 5.32.1 environment.yml

Size: 50.8 KB - Last synced: 3 months ago - Pushed: 3 months ago

pablorr24/metagenomics_snakemake
Snakemake-based pipeline for metagenomics classification. Currently support short-reads Illumina Sequences and long-reads ONT Sequences.
  • 5.32.1 environment.yml

Size: 75.2 KB - Last synced: 7 days ago - Pushed: 8 days ago