Package Usage: pypi: pydna
Representing double stranded DNA and functions for simulating cloning and homologous recombination between DNA molecules.
103 versions
Latest release: almost 2 years ago
4 dependent packages
2,459 downloads last month
View more package details: https://packages.ecosyste.ms/registries/pypi.org/packages/pydna
Dependent Repos 15
manulera/OpenCloning_backend
The backend application for OpenCloningSize: 3.04 MB - Last synced: 5 days ago - Pushed: 6 days ago
rmcl/supergsl
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ychanc2104/django_project
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sclamons/murraylab_tools
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EthanHolleman/plasmid-VR-design
Snakemake wrapped Python and R based workflow for generating and visualizing nucleotide regions with systematic variation in GC / AT skew and GC / AT content with or without clustering for R-loop formation investigation.Size: 11.3 MB - Last synced: about 2 years ago - Pushed: over 3 years ago
BjornFJohansson/ypkpathway
Automatic pathway assembly with the YeastPathwayKitSize: 37.1 MB - Last synced: 14 days ago - Pushed: about 2 years ago
lgioppo/HackathonCCR-TrukBot
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LucasEdu10/Hackathon---CCR
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hiyama341/teemi
teemi: A Python package for reproducible and FAIR microbial strain construction. Simulate the entire dbtl-cycle, generate genetic parts, design libraries, and track samples. Open-source Python platform for workflow flexibility and automated tasks, accelerating metabolic engineering. Try teemi with our Google Colab notebooks!Size: 98.3 MB - Last synced: 7 days ago - Pushed: 2 months ago
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BjornFJohansson/pygenome
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illacceptanything/illacceptanything
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ntchambers/illacceptanything
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ychanc2104/docker_uwsgi_nginx_django
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ofirmamo/molecular-compuation
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TheBearodactyl/illacceptanything Fork of illacceptanything/illacceptanything
The project where literally anything* goes.Size: 1.33 GB - Last synced: almost 2 years ago - Pushed: almost 2 years ago
braillescreen/illacceptanything Fork of illacceptanything/illacceptanything
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boginw/illacceptanything Fork of illacceptanything/illacceptanything
The project where literally anything* goes.Size: 1.33 GB - Last synced: about 1 year ago - Pushed: over 1 year ago
zjuradoq/murraylab_tools Fork of biocircuits/murraylab_tools
Functions for building Echo picklists and directions for setting up source plates for the Echo. Mostly intended for setting up TX-TL experiments.Size: 30.5 MB - Last synced: 3 months ago - Pushed: 3 months ago
cplessis/ASVmaker
Package to create ASV reference Database. Especially for Qiime2 usage.Size: 60.3 MB - Last synced: 16 days ago - Pushed: 5 months ago
hiyama341/SignalPrimerGenerator
Size: 35.2 KB - Last synced: over 1 year ago - Pushed: over 1 year ago
philcharron-cfia/biogrinder
Biogrinder is a versatile open-source bioinformatic tool to create simulated omic shotgun and amplicon sequence libraries.Size: 394 KB - Last synced: 12 months ago - Pushed: 12 months ago
manulera/circular_alignments
Circular alignments exampleSize: 265 KB - Last synced: about 1 month ago - Pushed: 3 months ago
manulera/GateWayMine
Tools to mine plasmid sequences, build Gateway consensus sites and make a web application to host plasmid database of Gateway plasmidsSize: 5.98 MB - Last synced: about 1 month ago - Pushed: 2 months ago
shapiro-lab/MurrayLabTools_IshaanFork
Size: 6.96 MB - Last synced: 2 months ago - Pushed: 2 months ago
BjornFJohansson/pydnaweb
Online PCR simulator, Tm calculator and primer designer and more!Size: 1.17 MB - Last synced: 6 days ago - Pushed: 6 days ago
iAMB-RWTH-Aachen/Biocircuitsim
testing for Synth bio lectureSize: 430 KB - Last synced: 26 days ago - Pushed: 26 days ago
hiyama341/streptocad
StreptoCAD is an open-source toolbox that automates the design of genome engineering strategies in Streptomyces. It supports CRISPR-based workflows, generating primers, guide sequences, and plasmid simulations to accelerate genetic engineering and natural product discovery.Size: 217 MB - Last synced: 17 days ago - Pushed: 17 days ago