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Package Usage: pypi: simplesam
Simple pure Python SAM parser and objects for working with SAM records
12 versions
Latest release: almost 2 years ago
283 downloads last month
View more package details: https://packages.ecosyste.ms/registries/pypi.org/packages/simplesam
Dependent Repos 11
SwatiGiri/GenderCheck
- ==0.1.3 Other_requirements.txt
- ==0.1.3 requirements.txt
Size: 76.9 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
aneeshpanoli/pyngs
A python tool to work with next generation sequencing(NGS) data inside a Jupyter notebook - work in progress!- ==0.1.3.1 requirements.txt
Size: 29.3 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago
SahilJoshi123/TF-Cascade
- ==0.1.2 requirements.txt
Size: 7.16 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
mdshw5/simplesam
Simple pure Python SAM parser and objects for working with SAM records- * docs/requirements.txt
Size: 133 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago
Aj0SK/bachelor_thesis
- ==0.1.3.1 code/helpers/hypothesis/requirements.txt
Size: 1.3 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
mdshw5/fastqp
Simple FASTQ quality assessment using Python- * setup.py
Size: 2.57 MB - Last synced: 5 days ago - Pushed: almost 3 years ago
Novartis/pisces
PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.- * setup.py
Size: 17.6 MB - Last synced: 6 days ago - Pushed: 6 days ago
nxwi/illacceptanything Fork of illacceptanything/illacceptanything
The project where literally anything* goes.- * data/requirements.txt
Size: 1.33 GB - Last synced: 7 months ago - Pushed: over 1 year ago
bede/kindel
Indel-aware consensus from aligned BAMs- >=0.0.4 setup.py
Size: 80 MB - Last synced: 16 days ago - Pushed: 7 months ago
deepflare/airflow-bio-utils 📦
Airflow simple utilities for biological sequences- 0.1.4.0 poetry.lock
- ^0.1.3 pyproject.toml
Size: 229 KB - Last synced: 4 months ago - Pushed: almost 2 years ago
illacceptanything/illacceptanything
The project where literally anything* goes.- * data/requirements.txt
Size: 1.47 GB - Last synced: 10 days ago - Pushed: 10 days ago
edurand/fastqp Fork of mdshw5/fastqp
simple FASTQ quality assessment using Python- * setup.py
Size: 3.03 MB - Last synced: about 1 year ago - Pushed: over 8 years ago
ntchambers/illacceptanything
The project where literally anything* goes- * requirements.txt
Last synced: over 1 year ago
baklazan/nadavca
NAnopore DAta Variant CAller- * setup.py
Size: 72.3 KB - Last synced: 11 months ago - Pushed: over 4 years ago
brwnj/fastqp Fork of mdshw5/fastqp
Simple FASTQ quality assessment using Python- * setup.py
Size: 2.51 MB - Last synced: about 1 year ago - Pushed: over 8 years ago
TheBearodactyl/illacceptanything Fork of illacceptanything/illacceptanything
The project where literally anything* goes.- * data/requirements.txt
Size: 1.33 GB - Last synced: 10 months ago - Pushed: 10 months ago
papaemmelab/Asimomitis_ACM_2023
ICBBB 2023: Predicting Single Cell Genotypes from Single Cell Expression Profiles in AML Using Deep Learning- ==0.1.3.1 requirements.txt
Size: 66.4 KB - Last synced: 6 months ago - Pushed: 6 months ago
braillescreen/illacceptanything Fork of illacceptanything/illacceptanything
The project where literally anything* goes.- * data/requirements.txt
Size: 1.47 GB - Last synced: 9 months ago - Pushed: about 1 year ago
boginw/illacceptanything Fork of illacceptanything/illacceptanything
The project where literally anything* goes.- * data/requirements.txt
Size: 1.33 GB - Last synced: about 1 month ago - Pushed: 9 months ago
crasgaitis/442_fp
- ==0.1.4.1 requirements.txt
Size: 1.66 MB - Last synced: 5 months ago - Pushed: 5 months ago
hubmapconsortium/visium-pipeline
- * docker/quantification/requirements.txt
Size: 94.7 KB - Last synced: about 1 month ago - Pushed: about 1 month ago